The HIV-1 Envelope Glycoproteins


Book Description

The need for a vaccine against HIV is obvious, but the development of an effective vaccine has met with frustrations. The HIV envelope glycoproteins, residing in the viral membrane, are the sole viral proteins exposed on the outside of virus particles and.







Structure in Protein Chemistry


Book Description

The second edition of Structure in Protein Chemistry showcases the latest developments and innovations in the field of protein structure analysis and prediction. The book begins by explaining how proteins are purified and describes methods for elucidating their sequences of amino acids and defining their posttranslational modifications. Comprehensive explanations of crystallography and of noncovalent forces-ionic interactions, hydrogen bonding, and the hydrophobic effect-act as a prelude to an exhaustive description of the atomic details of the structures of proteins. The resulting understanding of protein molecular structure forms the basis for discussions of the evolution of proteins, the symmetry of the oligomeric associations that produce them, and the chemical, mathematical, and physical basis of the techniques used to study their structures. The latter include image reconstruction, nuclear magnetic resonance spectroscopy, proton exchange, optical spectroscopy, electrophoresis, covalent cross-linking, chemical modification, immunochemistry, hydrodynamics, and the scattering of light, X-radiation, and neutrons. These procedures are applied to study the folding of polypeptides and the assembly of oligomers. Biological membranes and their proteins are also discussed. Structure in Protein Chemistry, Second Edition, bridges the gap between introductory biophysical chemistry courses and research literature. It serves as a comprehensive textbook for advanced undergraduates and graduate students in biochemistry, biophysics, and structural and molecular biology. Professionals engaged in chemical, biochemical, and molecular biological research will find it a useful reference.




Encyclopedia of AIDS


Book Description




Viral Fusion Mechanisms


Book Description

Viral Fusion Mechanisms presents the first comprehensive review on this exciting topic. The book focuses on molecular mechanisms rather than phenomonology and examines a wide range of viruses, including influenza, HIV, Sendai, SFV, Vaccinia, VSV, and RSV. Recent theoretical work on dissecting protein-mediated membrane fusion is discussed, and the most promising new technologies for elucidating mechanisms are highlighted. Viral Fusion Mechanisms is an essential reference for biophysicists, cell biologists, colloid chemists, immunologists, microbiologists, molecular biologists, and virologists.




Lipid Domains


Book Description

Current Topics in Membranes is targeted toward scientists and researchers in biochemistry and molecular and cellular biology, providing the necessary membrane research to assist them in discovering the current state of a particular field and in learning where that field is heading. This volume offers an up to date presentation of current knowledge in the field of Lipid Domains. Written by leading experts Contains original material, both textual and illustrative, that should become a very relevant reference material The material is presented in a very comprehensive manner Both researchers in the field and general readers should find relevant and up-to-date information




Stable and Homogeneous HIV-1 Envelope Glycoprotein Trimers as Vaccine Candidates and Targets of Inhibitors


Book Description

The target of neutralizing antibodies (Abs) and entry inhibitors against HIV-1 is the envelope glycoprotein (Env) spike, a trimer of non-covalently associated gp120-gp41 heterodimers which mediates entry into target cells. The elicitation of neutralizing Abs against Env has been complicated by its instability and heterogeneity. To dissect Env heterogeneity on HIV-1, we developed a virus capture assay to probe virion-associated Env. We discovered that irrelevant Env varies greatly by genotype and expression vector, that immature gp160 persists at the virion surface, and that exogenous gp41 can bind to virions. We also assessed the functional stability of Env after exposure to heat, denaturants and prolonged incubations. Heat stability of Env trimers varied between HIV-1 isolates within a constrained range and correlated with stability to other conditions. The above studies revealed a complex picture of the antigenic surface of HIV-1. We next engineered Env trimers that were more stable and homogeneous than is typical. In the first approach, directed evolution of HIV-1 was used to select for virions displaying hyperstable Env trimers, and the stable Env was also more homogeneously trimeric than wild-type. These Env trimers will make interesting immunogens that do not require artificial stabilization. Second, chemical crosslinkers were used to covalently lock Env in trimeric conformation(s), after which irrelevant Env was depleted and Env trimers were purified. Immunization involving crosslinked Env trimers on proteoliposomes revealed that although crosslinking diminished the overall immunogenicity of Env, the Abs that were elicited sporadically neutralized different strains of HIV-1. Finally, we determined mechanistic details of a novel HIV-1 entry inhibitor, PF-68742. This compound blocks Env-mediated fusion at a post-attachment step. Env mutagenesis studies point to a gp120-gp41 interface involving gp120 C5, the disulfide loop and fusion peptide (FP) of gp41 as its likely target. PF-68742 and the inhibitor VIRIP both strongly enhanced the infectivity of viruses containing escape mutations in the FP. We hypothesize that these two inhibitors control FP insertion into the membrane by different mechanisms. Our results have illuminated new structure-function relationships in HIV-1 Env, and have produced new leads for the design of vaccine candidates and entry inhibitors against HIV-1.




HIV Glycans in Infection and Immunity


Book Description

Glycosylation is a common and extremely important modification in biological molecules, particularly of proteins. HIV Glycans in Infection and Immunity provides an overview of the roles of glycans in the transmission/infection, antigenicity, and immunogenicity of HIV and the HIV envelope glycoprotein.​ It explores recent advances in the understanding of the impact of HIV glycans in infection and their promise for immunological and therapeutic intervention. Novel collaborations between glycobiologists and immunologists in recent years have led to key advances in the understanding of HIV glycans. These cross-disciplinary endeavors, their achievements and their impact on the field are all addressed, herein.