Probability Models for DNA Sequence Evolution


Book Description

"What underlying forces are responsible for the observed patterns of variability, given a collection of DNA sequences?" In approaching this question a number of probability models are introduced and anyalyzed.Throughout the book, the theory is developed in close connection with data from more than 60 experimental studies that illustrate the use of these results.




Exploring Zynq Mpsoc


Book Description

This book introduces the Zynq MPSoC (Multi-Processor System-on-Chip), an embedded device from Xilinx. The Zynq MPSoC combines a sophisticated processing system that includes ARM Cortex-A53 applications and ARM Cortex-R5 real-time processors, with FPGA programmable logic. As well as guiding the reader through the architecture of the device, design tools and methods are also covered in detail: both the conventional hardware/software co-design approach, and the newer software-defined methodology using Xilinx's SDx development environment. Featured aspects of Zynq MPSoC design include hardware and software development, multiprocessing, safety, security and platform management, and system booting. There are also special features on PYNQ, the Python-based framework for Zynq devices, and machine learning applications. This book should serve as a useful guide for those working with Zynq MPSoC, and equally as a reference for technical managers wishing to gain familiarity with the device and its associated design methodologies.




Which Way Did the Bicycle Go?


Book Description

The best problems selected from over 25 years of the Problem of the Week at Macalester College.




Numerical Linear Algebra and Applications


Book Description

Full of features and applications, this acclaimed textbook for upper undergraduate level and graduate level students includes all the major topics of computational linear algebra, including solution of a system of linear equations, least-squares solutions of linear systems, computation of eigenvalues, eigenvectors, and singular value problems. Drawing from numerous disciplines of science and engineering, the author covers a variety of motivating applications. When a physical problem is posed, the scientific and engineering significance of the solution is clearly stated. Each chapter contains a summary of the important concepts developed in that chapter, suggestions for further reading, and numerous exercises, both theoretical and MATLAB and MATCOM based. The author also provides a list of key words for quick reference. The MATLAB toolkit available online, 'MATCOM', contains implementations of the major algorithms in the book and will enable students to study different algorithms for the same problem, comparing efficiency, stability, and accuracy.




The Mathematical Olympiad Handbook


Book Description

Olympiad problems help able school students flex their mathematical muscles. Good Olympiad problems are unpredictable: this makes them worthwhile but it also makes them seem hard and even unapproachable. The Mathematical Olympiad Handbook contains some of the problems and solutions from the British Mathematical Olympiads from 1965 to 1996 in a form designed to help bright students overcome this barrier.




Data Analysis and Decision Support


Book Description

It is a great privilege and pleasure to write a foreword for a book honor ing Wolfgang Gaul on the occasion of his sixtieth birthday. Wolfgang Gaul is currently Professor of Business Administration and Management Science and the Head of the Institute of Decision Theory and Management Science, Faculty of Economics, University of Karlsruhe (TH), Germany. He is, by any measure, one of the most distinguished and eminent scholars in the world today. Wolfgang Gaul has been instrumental in numerous leading research initia tives and has achieved an unprecedented level of success in facilitating com munication among researchers in diverse disciplines from around the world. A particularly remarkable and unique aspect of his work is that he has been a leading scholar in such diverse areas of research as graph theory and net work models, reliability theory, stochastic optimization, operations research, probability theory, sampling theory, cluster analysis, scaling and multivariate data analysis. His activities have been directed not only at these and other theoretical topics, but also at applications of statistical and mathematical tools to a multitude of important problems in computer science (e.g., w- mining), business research (e.g., market segmentation), management science (e.g., decision support systems) and behavioral sciences (e.g., preference mea surement and data mining). All of his endeavors have been accomplished at the highest level of professional excellence.




Data Assimilation for Atmospheric, Oceanic and Hydrologic Applications


Book Description

Data assimilation (DA) has been recognized as one of the core techniques for modern forecasting in various earth science disciplines including meteorology, oceanography, and hydrology. Since early 1990s DA has been an important s- sion topic in many academic meetings organized by leading societies such as the American Meteorological Society, American Geophysical Union, European G- physical Union, World Meteorological Organization, etc. nd Recently, the 2 Annual Meeting of the Asia Oceania Geosciences Society (AOGS), held in Singapore in June 2005, conducted a session on DA under the - tle of “Data Assimilation for Atmospheric, Oceanic and Hydrologic Applications.” nd This rst DA session in the 2 AOGS was a great success with more than 30 papers presented and many great ideas exchanged among scientists from the three different disciplines. The scientists who participated in the meeting suggested making the DA session a biennial event. th Two years later, at the 4 AOGS Annual Meeting, Bangkok, Thailand, the DA session was of cially named “Sasaki Symposium on Data Assimilation for At- spheric, Oceanic and Hydrologic Applications,” to honor Prof. Yoshi K. Sasaki of the University of Oklahoma for his life-long contributions to DA in geosciences.




Exploratory Data Analysis with MATLAB


Book Description

Praise for the Second Edition: "The authors present an intuitive and easy-to-read book. ... accompanied by many examples, proposed exercises, good references, and comprehensive appendices that initiate the reader unfamiliar with MATLAB." —Adolfo Alvarez Pinto, International Statistical Review "Practitioners of EDA who use MATLAB will want a copy of this book. ... The authors have done a great service by bringing together so many EDA routines, but their main accomplishment in this dynamic text is providing the understanding and tools to do EDA. —David A Huckaby, MAA Reviews Exploratory Data Analysis (EDA) is an important part of the data analysis process. The methods presented in this text are ones that should be in the toolkit of every data scientist. As computational sophistication has increased and data sets have grown in size and complexity, EDA has become an even more important process for visualizing and summarizing data before making assumptions to generate hypotheses and models. Exploratory Data Analysis with MATLAB, Third Edition presents EDA methods from a computational perspective and uses numerous examples and applications to show how the methods are used in practice. The authors use MATLAB code, pseudo-code, and algorithm descriptions to illustrate the concepts. The MATLAB code for examples, data sets, and the EDA Toolbox are available for download on the book’s website. New to the Third Edition Random projections and estimating local intrinsic dimensionality Deep learning autoencoders and stochastic neighbor embedding Minimum spanning tree and additional cluster validity indices Kernel density estimation Plots for visualizing data distributions, such as beanplots and violin plots A chapter on visualizing categorical data




Nonpositive Curvature: Geometric and Analytic Aspects


Book Description

The present book contains the lecture notes from a "Nachdiplomvorlesung", a topics course adressed to Ph. D. students, at the ETH ZUrich during the winter term 95/96. Consequently, these notes are arranged according to the requirements of organizing the material for oral exposition, and the level of difficulty and the exposition were adjusted to the audience in Zurich. The aim of the course was to introduce some geometric and analytic concepts that have been found useful in advancing our understanding of spaces of nonpos itive curvature. In particular in recent years, it has been realized that often it is useful for a systematic understanding not to restrict the attention to Riemannian manifolds only, but to consider more general classes of metric spaces of generalized nonpositive curvature. The basic idea is to isolate a property that on one hand can be formulated solely in terms of the distance function and on the other hand is characteristic of nonpositive sectional curvature on a Riemannian manifold, and then to take this property as an axiom for defining a metric space of nonposi tive curvature. Such constructions have been put forward by Wald, Alexandrov, Busemann, and others, and they will be systematically explored in Chapter 2. Our focus and treatment will often be different from the existing literature. In the first Chapter, we consider several classes of examples of Riemannian manifolds of nonpositive curvature, and we explain how conditions about nonpos itivity or negativity of curvature can be exploited in various geometric contexts.




Nonlinear Time Series Analysis


Book Description

A comprehensive resource that draws a balance between theory and applications of nonlinear time series analysis Nonlinear Time Series Analysis offers an important guide to both parametric and nonparametric methods, nonlinear state-space models, and Bayesian as well as classical approaches to nonlinear time series analysis. The authors—noted experts in the field—explore the advantages and limitations of the nonlinear models and methods and review the improvements upon linear time series models. The need for this book is based on the recent developments in nonlinear time series analysis, statistical learning, dynamic systems and advanced computational methods. Parametric and nonparametric methods and nonlinear and non-Gaussian state space models provide a much wider range of tools for time series analysis. In addition, advances in computing and data collection have made available large data sets and high-frequency data. These new data make it not only feasible, but also necessary to take into consideration the nonlinearity embedded in most real-world time series. This vital guide: • Offers research developed by leading scholars of time series analysis • Presents R commands making it possible to reproduce all the analyses included in the text • Contains real-world examples throughout the book • Recommends exercises to test understanding of material presented • Includes an instructor solutions manual and companion website Written for students, researchers, and practitioners who are interested in exploring nonlinearity in time series, Nonlinear Time Series Analysis offers a comprehensive text that explores the advantages and limitations of the nonlinear models and methods and demonstrates the improvements upon linear time series models.