Community Structure and Co-operation in Biofilms


Book Description

The study of biofilm considers the close association of micro-organisms with each other at interfaces and is relevant to a variety of disciplines, including medicine, dentistry, bioremediation, biofouling, water technology, engineering and food science. Although the habitats studied differ widely, some common elements exist such as method of attachment, coadhesion and regulation of biofilm phenotype and architecture. This book aims to distil the common principles of biofilm physiology and growth for all interested disciplines.




The Social Biology of Microbial Communities


Book Description

Beginning with the germ theory of disease in the 19th century and extending through most of the 20th century, microbes were believed to live their lives as solitary, unicellular, disease-causing organisms . This perception stemmed from the focus of most investigators on organisms that could be grown in the laboratory as cellular monocultures, often dispersed in liquid, and under ambient conditions of temperature, lighting, and humidity. Most such inquiries were designed to identify microbial pathogens by satisfying Koch's postulates.3 This pathogen-centric approach to the study of microorganisms produced a metaphorical "war" against these microbial invaders waged with antibiotic therapies, while simultaneously obscuring the dynamic relationships that exist among and between host organisms and their associated microorganisms-only a tiny fraction of which act as pathogens. Despite their obvious importance, very little is actually known about the processes and factors that influence the assembly, function, and stability of microbial communities. Gaining this knowledge will require a seismic shift away from the study of individual microbes in isolation to inquiries into the nature of diverse and often complex microbial communities, the forces that shape them, and their relationships with other communities and organisms, including their multicellular hosts. On March 6 and 7, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats hosted a public workshop to explore the emerging science of the "social biology" of microbial communities. Workshop presentations and discussions embraced a wide spectrum of topics, experimental systems, and theoretical perspectives representative of the current, multifaceted exploration of the microbial frontier. Participants discussed ecological, evolutionary, and genetic factors contributing to the assembly, function, and stability of microbial communities; how microbial communities adapt and respond to environmental stimuli; theoretical and experimental approaches to advance this nascent field; and potential applications of knowledge gained from the study of microbial communities for the improvement of human, animal, plant, and ecosystem health and toward a deeper understanding of microbial diversity and evolution. The Social Biology of Microbial Communities: Workshop Summary further explains the happenings of the workshop.




Biofilms in Wastewater Treatment


Book Description

The central theme of the book is the flow of information from experimental approaches in biofilm research to simulation and modeling of complex wastewater systems. Probably the greatest challenge in wastewater research lies in using the methods and the results obtained in one scientific discipline to design intelligent experiments in other disciplines, and eventually to improve the knowledge base the practitioner needs to run wastewater treatment plants. The purpose of Biofilms in Wastewater Treatment is to provide engineers with the knowledge needed to apply the new insights gained by researchers. The authors provide an authoritative insight into the function of biofilms on a technical and on a lab-scale, cover some of the exciting new basic microbiological and wastewater engineering research involving molecular biology techniques and microscopy, and discuss recent attempts to predict the development of biofilms. This book is divided into 3 sections: Modeling and Simulation; Architecture, Population Structure and Function; and From Fundamentals to Practical Application, which all start with a scientific question. Individual chapters attempt to answer the question and present different angles of looking at problems. In addition there is an extensive glossary to familiarize the non-expert with unfamiliar terminology used by microbiologists and computational scientists. The colour plate section of this book can be downloaded by clicking here. (PDF Format 1 MB)




Microbial Biofilms


Book Description

Biochemistry and ecology of biofilms from industrial, medical and other viewpoints.




Bacterial Disease Mechanisms


Book Description

Introductory textbook describing the ways in which bacteria cause disease at the molecular and cellular level.




Protected Land


Book Description

By many measures, Earth’s ecosystems are stressed. Actually, it may be more accurate to say that Earth’s remaining ecosystems are stressed. The fact is that most of the planet’s biomes support only a fraction of the biological communities they once did, primarily because humans have converted large areas of land to alternate uses. More than two-thirds of the global temperate forests, half of the grasslands, even a third of desert ecosystems have been conscripted for human uses like agriculture, construction, harvest and extraction. Cultivation alone covers a quarter of the habitable terrestrial surface. Aquatic ecosystems have not fared any better. An estimated half of the world’s wetlands are gone, particularly those of coastal regions or on arable land. About a fifth of the coral reefs and a third of the m- grove swamps of a century ago have been lost in just the last few decades. The volume of water impounded by dams quadrupled over the same period – it now far exceeds the volume of water in unimpeded rivers (Millennium Ecosystem Assessment 2005; Mitsch and Gosselink 2007). So any assessment of ecosystem status is necessarily an analysis of fragments and remnants, and many of these are degraded by one or more anthropogenic stressors.




Bacterial Biofilms


Book Description

This book examines biofilms in nature. Organized into four parts, this book addresses biofilms in wastewater treatment, inhibition of biofilm formation, biofilms and infection, and ecology of biofilms. It is designed for clinicians, researchers, and industry professionals in the fields of microbiology, biotechnology, ecology, and medicine as well as graduate and postgraduate students.




Handbook of Water and Wastewater Microbiology


Book Description

"Access to safe water is a fundamental human need and therefore a basic human right" --Kofi Annan, United Nations Secretary General Edited by two world-renowned scientists in the field, The Handbook of Water and Wastewater Microbiology provides a definitive and comprehensive coverage of water and wastewater microbiology. With contributions from experts from around the world, this book gives a global perspective on the important issues faced in the provision of safe drinking water, the problems of dealing with aquatic pollution and the processes involved in wastewater management. Starting with an introductory chapter of basic microbiological principles, The Handbook of Water and Wastewater Microbiology develops these principles further, ensuring that this is the essential text for process engineers with little microbiological experience and specialist microbiologists alike. Comprehensive selection of reviews dealing with drinking water and aquatic pollution Provides an understading of basic microbiology and how it is applied to engineering process solutions Suitable for all levels of knowledge in microbiology -from those with no background to specialists who require the depth of information




Molecular Biology and Cultural Heritage


Book Description

This book contains forty reviewed papers delivered at the International Congress on Molecular Biology and Cultural Heritage held in Seville, March 2003. It is divided in four parts, the first one presents the state-of-the-art and reviews molecular techniques applied to the study of microbial communities colonizing monuments and cultural heritage assets. Part two covers specific molecular techniques used in biodetereoration studies, part three includes an updated overview on on-going biodetereoration European Commission projects, and part four presents selected biodetereoration case studies from all over the world.




Conflict and Cooperation in Microbial Societies


Book Description

The most evident aspect of biodiversity is the variety of complex forms and behaviors among organisms, both living and extinct. Comparative molecular and physiological studies show that the evolution of complex phenotypic traits involves multiple levels of biological organization (i.e. genes, chromosomes, organelles, cells, individual organisms, species, etc.). Regardless of the specific molecular mechanisms and details, the evolution of different complex biological organizations share a commonality: cooperation and conflict among the parts of the biological unit under study. The potential for conflict among parts is abundant. How then do complex systems persist, given the necessity of cooperative behavior for their maintenance, when the potential for conflict occurs across all levels of biological organization? In this Research Topic and eBook we present ideas and work on the question, how coexistence of biological components at different levels of organization persists in the face of antagonistic, conflicting or even exploitative behavior of the parts? The goal of this topic is in presenting examples of cooperation and conflict at different levels of biological organization to discuss the consequences that this “tension” have had in the diversification and emergence of novel phenotypic traits. Exemplary cases are studies investigating: the evolution of genomes, formation of colonial aggregates of cells, biofilms, the origin and maintenance of multicellular organisms, and the stable coexistence of multispecies consortia producing a cooperative product. Altogether, we hope that the contributions to this Research Topic build towards mechanistic knowledge of the biological phenomenon of coexistence in the face of conflict. We believe that knowledge on the mechanisms of the origin and evolutionary maintenance of cooperation has implications beyond evolutionary biology such as novel approaches in controlling microbial infections in medicine and the modes by studies in synthetic biology are conducted when designing economically important microbial consortia.