Dynamic Energy and Mass Budgets in Biological Systems


Book Description

The Dynamic Energy Budget theory unifies the commonalties between organisms, as prescribed by the implications of energetics, and links different levels of biological organisation (cells, organisms and populations). The theory presents simple mechanistic rules that describe the uptake and use of energy and nutrients and the consequences for physiological organization throughout an organism's life cycle. All living organisms are covered in a single quantitative framework, the predictions of which are tested against a variety of experimental results at a range of levels of organisation. The theory explains many general observations, such as the body size scaling relationships of certain physiological traits, and provides a theoretical underpinning to the method of indirect calorimetry. In each case, the theory is developed in elementary mathematical terms, but a more detailed discussion of the methodological aspects of mathematical modelling is also included.




Dynamic Energy Budget Theory for Metabolic Organisation


Book Description

The Dynamic Energy Budget theory unifies the commonalities between organisms and links different levels of biological organisation.







A Systems Biology Approach to Advancing Adverse Outcome Pathways for Risk Assessment


Book Description

Social pressure to minimize the use of animal testing, the ever-increasing concern on animal welfare, and the need for more human-relevant and more predictive toxicity tests are some of the drivers for new approaches to chemical screening. This book focuses on The Adverse Outcome Pathway, an analytical construct that describes a sequential chain of causally linked events at different levels of biological organization that lead to an adverse health or ecotoxicological effect. While past efforts have focused on toxicological pathway-based vision for human and ecological health assessment relying on in vitro systems and predictive models, The Adverse Outcome Pathway framework provides a simplified and structured way to organize toxicological information. Within the book, a systems biology approach supplies the tools to infer, link, and quantify the molecular initiating events and the key events and key event relationships leading to adverse outcomes. The advancement of these tools is crucial for the successful implementation of AOPs for regulatory purposes.




Southwood's Ecological Methods


Book Description

Ecological Methods by the late T.R. E. Southwood and revised over the years by P. A. Henderson has developed into a classic reference work for the field biologist. It provides a handbook of ecological methods and analytical techniques pertinent to the study of animals, with an emphasis on non-microscopic animals in both terrestrial and aquatic environments. It remains unique in the breadth of the methods presented and in the depth of the literature cited, stretching right back to the earliest days of ecological research. The universal availability of R as an open source package has radically changed the way ecologists analyse their data. In response, Southwood's classic text has been thoroughly revised to be more relevant and useful to a new generation of ecologists, making the vast resource of R packages more readily available to the wider ecological community. By focusing on the use of R for data analysis, supported by worked examples, the book is now more accessible than previous editions to students requiring support and ideas for their projects. Southwood's Ecological Methods provides a crucial resource for both graduate students and research scientists in applied ecology, wildlife ecology, fisheries, agriculture, conservation biology, and habitat ecology. It will also be useful to the many professional ecologists, wildlife biologists, conservation biologists and practitioners requiring an authoritative overview of ecological methodology.




Thermodynamics and Ecological Modelling


Book Description

Thermodynamics is used increasingly in ecology to understand the system properties of ecosystems because it is a basic science that describes energy transformation from a holistic view. In the last decade, many contributions to ecosystem theory based on thermodynamics have been published, therefore an important step toward integrating these theories and encouraging a more wide spread use of them is to present them in one volume. An ecosystem consists of interdependent living organisms that are also interdependent with their environment, all of which are involved in a constant transfer of energy and mass within a general state of equilibrium or dis-equilibrium. Thermodynamics can quantify exactly how "organized" or "disorganized" a system is - an extremely useful to know when trying to understand how a dynamic ecosystem is behaving. A part of the Environmental and Ecological (Math) Modeling series, Thermodynamics and Ecology is a book-length study - the first of its kind - of the current thinking on how an ecosystem can be explained and predicted in terms of its thermodynamical behavior. After the introductory chapters on the fundamentals of thermodynamics, the book explains how thermodynamic theory can be specifically applied to the "measurement" of an ecosystem, including the assessment of its state of entropy and enthalpy. Additionally, it will show economists how to put these theories to use when trying to quantify the movement of goods and services through another type of complex living system - a human society.




Population and Community Ecology of Ontogenetic Development


Book Description

Most organisms show substantial changes in size or morphology after they become independent of their parents and have to find their own food. Furthermore, the rate at which these changes occur generally depends on the amount of food they ingest. In this book, André de Roos and Lennart Persson advance a synthetic and individual-based theory of the effects of this plastic ontogenetic development on the dynamics of populations and communities. De Roos and Persson show how the effects of ontogenetic development on ecological dynamics critically depend on the efficiency with which differently sized individuals convert food into new biomass. Differences in this efficiency--or ontogenetic asymmetry--lead to bottlenecks in and thus population regulation by either maturation or reproduction. De Roos and Persson investigate the community consequences of these bottlenecks for trophic configurations that vary in the number and type of interacting species and in the degree of ontogenetic niche shifts exhibited by their individuals. They also demonstrate how insights into the effects of maturation and reproduction limitation on community equilibrium carry over to the dynamics of size-structured populations and give rise to different types of cohort-driven cycles. Featuring numerous examples and tests of modeling predictions, this book provides a pioneering and extensive theoretical and empirical treatment of the ecology of ontogenetic growth and development in organisms, emphasizing the importance of an individual-based perspective for understanding population and community dynamics.




Biology of Stress in Fish


Book Description

Biology of Stress in Fish: Fish Physiology provides a general understanding on the topic of stress biology, including most of the recent advances in the field. The book starts with a general discussion of stress, providing answers to issues such as its definition, the nature of the physiological stress response, and the factors that affect the stress response. It also considers the biotic and abiotic factors that cause variation in the stress response, how the stress response is generated and controlled, its effect on physiological and organismic function and performance, and applied assessment of stress, animal welfare, and stress as related to model species. - Provides the definitive reference on stress in fish as written by world-renowned experts in the field - Includes the most recent advances and up-to-date thinking about the causes of stress in fish, their implications, and how to minimize the negative effects - Considers the biotic and abiotic factors that cause variation in the stress response




Reproductive Biology


Book Description

This is the sixth volume of a ten-volume series on The Natural History of the Crustacea. The volume synthesizes in nineteen chapters our current understanding of diverse topics in crustacean reproductive biology. In the first part of this book, the chapters address allocation strategies to reproduction, gamete production, brooding behavior, and other components of parental care in crustaceans. The second part of the volume centers on sexual systems in crustaceans. The third section of the volume covers crustacean mating systems and sexual selection. Reproductive Biology ends with three chapters covering diverse topics including reproductive rhythms, crustacean personality research, and record breaking crustaceans with respect to reproductive characters.




The Natural History of the Crustacea: Reproductive Biology


Book Description

This is the sixth volume of a ten-volume series on The Natural History of the Crustacea. The volume synthesizes in nineteen chapters our current understanding of diverse topics in crustacean reproductive biology. In the first part of this book, the chapters address allocation strategies to reproduction, gamete production, brooding behavior, and other components of parental care in crustaceans. The second part of the volume centers on sexual systems in crustaceans. The third section of the volume covers crustacean mating systems and sexual selection. Reproductive Biology ends with three chapters covering diverse topics including reproductive rhythms, crustacean personality research, and record breaking crustaceans with respect to reproductive characters.