Multiscale Models in Mechano and Tumor Biology


Book Description

This book presents and discusses the state of the art and future perspectives in mathematical modeling and homogenization techniques with the focus on addressing key physiological issues in the context of multiphase healthy and malignant biological materials. The highly interdisciplinary content brings together contributions from scientists with complementary areas of expertise, such as pure and applied mathematicians, engineers, and biophysicists. The book also features the lecture notes from a half-day introductory course on asymptotic homogenization. These notes are suitable for undergraduate mathematics or physics students, while the other chapters are aimed at graduate students and researchers.




Numerical Methods for Flows


Book Description

This book includes selected contributions on applied mathematics, numerical analysis, numerical simulation and scientific computing related to fluid mechanics problems, presented at the FEF-“Finite Element for Flows” conference, held in Rome in spring 2017. Written by leading international experts and covering state-of-the-art topics in numerical simulation for flows, it provides fascinating insights into and perspectives on current and future methodological and numerical developments in computational science. As such, the book is a valuable resource for researchers, as well as Masters and Ph.D students.




Boundary and Interior Layers, Computational and Asymptotic Methods BAIL 2018


Book Description

This volume gathers papers presented at the international conference BAIL, which was held at the University of Strathclyde, Scotland from the 14th to the 22nd of June 2018. The conference gathered specialists in the asymptotic and numerical analysis of problems which exhibit layers and interfaces. Covering a wide range of topics and sharing a wealth of insights, the papers in this volume provide an overview of the latest research into the theory and numerical approximation of problems involving boundary and interior layers.




Spectral and High Order Methods for Partial Differential Equations ICOSAHOM 2018


Book Description

This open access book features a selection of high-quality papers from the presentations at the International Conference on Spectral and High-Order Methods 2018, offering an overview of the depth and breadth of the activities within this important research area. The carefully reviewed papers provide a snapshot of the state of the art, while the extensive bibliography helps initiate new research directions.




An Introduction to Element-Based Galerkin Methods on Tensor-Product Bases


Book Description

This book introduces the reader to solving partial differential equations (PDEs) numerically using element-based Galerkin methods. Although it draws on a solid theoretical foundation (e.g. the theory of interpolation, numerical integration, and function spaces), the book’s main focus is on how to build the method, what the resulting matrices look like, and how to write algorithms for coding Galerkin methods. In addition, the spotlight is on tensor-product bases, which means that only line elements (in one dimension), quadrilateral elements (in two dimensions), and cubes (in three dimensions) are considered. The types of Galerkin methods covered are: continuous Galerkin methods (i.e., finite/spectral elements), discontinuous Galerkin methods, and hybridized discontinuous Galerkin methods using both nodal and modal basis functions. In addition, examples are included (which can also serve as student projects) for solving hyperbolic and elliptic partial differential equations, including both scalar PDEs and systems of equations.




DUNE — The Distributed and Unified Numerics Environment


Book Description

The Distributed and Unified Numerics Environment (Dune) is a set of open-source C++ libraries for the implementation of finite element and finite volume methods. Over the last 15 years it has become one of the most commonly used libraries for the implementation of new, efficient simulation methods in science and engineering. Describing the main Dune libraries in detail, this book covers access to core features like grids, shape functions, and linear algebra, but also higher-level topics like function space bases and assemblers. It includes extensive information on programmer interfaces, together with a wealth of completed examples that illustrate how these interfaces are used in practice. After having read the book, readers will be prepared to write their own advanced finite element simulators, tapping the power of Dune to do so.




Numerical Geometry, Grid Generation and Scientific Computing


Book Description

The focus of these conference proceedings is on research, development, and applications in the fields of numerical geometry, scientific computing and numerical simulation, particularly in mesh generation and related problems. In addition, this year’s special focus is on Delaunay triangulations and their applications, celebrating the 130th birthday of Boris Delaunay. In terms of content, the book strikes a balance between engineering algorithms and mathematical foundations. It presents an overview of recent advances in numerical geometry, grid generation and adaptation in terms of mathematical foundations, algorithm and software development and applications. The specific topics covered include: quasi-conformal and quasi-isometric mappings, hyperelastic deformations, multidimensional generalisations of the equidistribution principle, discrete differential geometry, spatial and metric encodings, Voronoi-Delaunay theory for tilings and partitions, duality in mathematical programming and numerical geometry, mesh-based optimisation and optimal control methods. Further aspects examined include iterative solvers for variational problems and algorithm and software development. The applications of the methods discussed are multidisciplinary and include problems from mathematics, physics, biology, chemistry, material science, and engineering.




Numerical Mathematics and Advanced Applications ENUMATH 2019


Book Description

This book gathers outstanding papers presented at the European Conference on Numerical Mathematics and Advanced Applications (ENUMATH 2019). The conference was organized by Delft University of Technology and was held in Egmond aan Zee, the Netherlands, from September 30 to October 4, 2019. Leading experts in the field presented the latest results and ideas regarding the design, implementation and analysis of numerical algorithms, as well as their applications to relevant societal problems. ENUMATH is a series of conferences held every two years to provide a forum for discussing basic aspects and new trends in numerical mathematics and scientific and industrial applications, all examined at the highest level of international expertise. The first ENUMATH was held in Paris in 1995, with successive installments at various sites across Europe, including Heidelberg (1997), Jyvaskyla (1999), lschia Porto (2001), Prague (2003), Santiago de Compostela (2005), Graz (2007), Uppsala (2009), Leicester (2011), Lausanne (2013), Ankara (2015) and Bergen (2017).




Multiscale Modeling in Biomechanics and Mechanobiology


Book Description

Presenting a state-of-the-art overview of theoretical and computational models that link characteristic biomechanical phenomena, this book provides guidelines and examples for creating multiscale models in representative systems and organisms. It develops the reader's understanding of and intuition for multiscale phenomena in biomechanics and mechanobiology, and introduces a mathematical framework and computational techniques paramount to creating predictive multiscale models. Biomechanics involves the study of the interactions of physical forces with biological systems at all scales – including molecular, cellular, tissue and organ scales. The emerging field of mechanobiology focuses on the way that cells produce and respond to mechanical forces – bridging the science of mechanics with the disciplines of genetics and molecular biology. Linking disparate spatial and temporal scales using computational techniques is emerging as a key concept in investigating some of the complex problems underlying these disciplines. Providing an invaluable field manual for graduate students and researchers of theoretical and computational modelling in biology, this book is also intended for readers interested in biomedical engineering, applied mechanics and mathematical biology.




The Mathematics of Mechanobiology


Book Description

This book presents the state of the art in mathematical research on modelling the mechanics of biological systems – a science at the intersection between biology, mechanics and mathematics known as mechanobiology. The book gathers comprehensive surveys of the most significant areas of mechanobiology: cell motility and locomotion by shape control (Antonio DeSimone); models of cell motion and tissue growth (Benoît Perthame); numerical simulation of cardiac electromechanics (Alfio Quarteroni); and power-stroke-driven muscle contraction (Lev Truskinovsky). Each section is self-contained in terms of the biomechanical background, and the content is accessible to all readers with a basic understanding of differential equations and numerical analysis. The book disentangles the phenomenological complexity of the biomechanical problems, while at the same time addressing the mathematical complexity with invaluable clarity. The book is intended for a wide audience, in particular graduate students and applied mathematicians interested in entering this fascinating field.