The Duckweed Genomes


Book Description

This book tells the story behind the first Spirodela genome sequencing project. Further, it describes the current genomics applications of these findings, and efforts to sequence new genomes within the family. The closing chapters address the sequencing of the over 1 Gigabase Wolffia genomes, which could have major impacts on genome evolution and agricultural research. The duckweed or Lemnaceae family is a collection of 5 genera and 37 species of the smallest, fastest-growing flowering plants. Many of these aquatic monocotyledonous plants can grow all over the world, in a variety of climates. Given their simplified and neotenous morphology, duckweeds have been researched for several decades as a model species for plant physiology and ecotoxicological research, contributing to our understanding e.g. of flowering response, plant circadian systems, sulfur assimilation pathways and auxin biosynthesis. In addition, duckweed-based treatment has been a favorite and feasible means, especially in developing countries, of removing phosphorus and pharmaceutical chemicals from sewage and wastewater. With a dry annual mass yield per hectare of up to 80 tonnes (equivalent to 10 tonnes of protein), duckweed is also a promising aquatic crop in new modern and sustainable agriculture. Besides being an excellent primary or supplemental feedstock for the production of livestock and fish, duckweed biomass can be utilized as a potential resource for human nutrition, biofuel, or bioplastics, depending on water quality as well as protein or starch accumulating procedures. These academic and commercial interests have led to international efforts to sequence the Spirodela polyrhiza genome, the smallest and most ancient genome in the family.







Plant Genomes


Book Description

Recent major advances in the field of comparative genomics and cytogenomics of plants, particularly associated with the completion of ambitious genome projects, have uncovered astonishing facets of the architecture and evolutionary history of plant genomes. The aim of this book was to review these recent developments as well as their implications in our understanding of the mechanisms which drive plant diversity. New insights into the evolution of gene functions, gene families and genome size are presented, with particular emphasis on the evolutionary impact of polyploidization and transposable elements. Knowledge on the structure and evolution of plant sex chromosomes, centromeres and microRNAs is reviewed and updated. Taken together, the contributions by internationally recognized experts present a panoramic overview of the structural features and evolutionary dynamics of plant genomes.This volume of Genome Dynamics will provide researchers, teachers and students in the fields of biology and agronomy with a valuable source of current knowledge on plant genomes.







Genetics and Genomics of Pineapple


Book Description

This book is the first comprehensive volume on the genetics and genomics of pineapple and provides an overview of the current state of pineapple research. Pineapple [Ananas comosus (L.) Merr.] is the second most important tropical fruit after banana in term of international trade. Its features are advantageous for genomic research: it has a small genome of 527 Mb which is diploid and vegetatively propagated; it is monocot, closely related to the grass family that includes major cereal crops, wheat, rice, corn, sorghum, and millet; and it serves as an out group for genetic and genomic research in grasses. In addition to exploring the evolution and improvement of pineapple, this work examines the pineapple genome with respect to genome structure and organization, comparative analyses with other angiosperm genomes, transcription factors, disease resistance, and circadian clock regulation of CAM related genes. With chapters covering botanical, genetic, genomic, and applied aspects of pineapple, this text also encourages the application of genomic technologies and suggests future prospects.




The Molecular Biology of Plant Cells


Book Description

Plant cell structure and function; Gene expression and its regulation in plant cells; The manipulation of plant cells.




Plant Comparative Genomics


Book Description

This detailed book presents recent methodologies for the task of inspecting the genomic world of plants, extracting valuable information, and presenting it in a readable way. With a focus on bioinformatics tools, the volume explores phylogenetics and evolution, Omics analysis, as well as experimental procedures for trait characterization. Written for the highly successful Methods in Molecular Biology series, chapters include the kind of vital expert implementation advice that will lead to successful results. Authoritative and practical, Plant Comparative Genomics serves as an ideal resource for researchers looking to implement comparative tools in order to explore their genomic data for their daily scientific work.




Biotechnological Advances in Agriculture, Healthcare, Environment and Industry


Book Description

There has been a surge in critical situations such as malnutrition, agricultural productivity, viral diseases, noncommunicable diseases, antibiotic resistance, and depletion of natural resourcest hreatening human welfare during the last decade. Fortunately, a parallel unprecedented growth and development have also taken place in various biotechnological sectors, giving hope and direction to meet these challenges. This book has been written with a very clear purpose of highlighting the contributions of modern biotechnology in solving emerging problems in various sectors. It has been divided into four major sections: Agricultural Biotechnology, Healthcare Biotechnology, Environmental Biotechnology, and Industrial Biotechnology. The chapters under each section are dedicated to the latest developments with comprehensive information about background, prospects, and applications. We have tried to incorporate the latest innovative biotechnological solutions such as biofortification, exome sequencing, genome sequencing, RNAi, drug discovery, nutrigenomics, bioremediation, nanobiotechnology and many more which have contributed remarkably in recent years to address the modern challenges in various sectors. The key highlights of this book are as follows: • Multidisciplinary perspective of biotechnological approaches. • Extensive investigation of hot topics. • Updated information with relevant data and statistics. • Application-based study of biotechnology. • Profusely illustrated and labeled diagrams to supplement the descriptions. This fully updated book will serve as a high-value resource book for students, teachers, researchers, and industry personnel in various disciplines of life sciences, agricultural sciences, medicine, environment, and industrial biotechnology. It will serve as a comprehensive resource book to develop an in-depth understanding of the emerging challenges in the areas of human welfare and analyze the latest biotechnological advancements in the direction of solving these concerns.







The Date Palm Genome, Vol. 1


Book Description

This book is the first volume of a comprehensive assemblage of contemporary knowledge relevant to genomics and other omics in date palm. Volume 1 consists of 11 chapters arranged in 3 parts grouped according to subject. Part I, Biology and Phylogeny, focuses on date palm biology, evolution and origin. Part II, Biodiversity and Molecular Identification, covers conformity of in vitro derived plants, molecular markers, barcoding, pollinizer genetics and gender determination. Part III, Genome Mapping and Bioinformatics, addresses genome mapping of nuclear, chloroplast and mitochondrial DNA, in addition to a chapter on progress made in date palm bioinformatics. This volume represents the efforts of 30 international scientists from 10 countries and contains 78 figures and 30 tables to illustrate presented concepts. Volume 2 is published under the title: Omics and Molecular Breeding.