Systematics


Book Description

Systematics: A Course of Lectures is designed for use in an advanced undergraduate or introductory graduate level course in systematics and is meant to present core systematic concepts and literature. The book covers topics such as the history of systematic thinking and fundamental concepts in the field including species concepts, homology, and hypothesis testing. Analytical methods are covered in detail with chapters devoted to sequence alignment, optimality criteria, and methods such as distance, parsimony, maximum likelihood and Bayesian approaches. Trees and tree searching, consensus and super-tree methods, support measures, and other relevant topics are each covered in their own sections. The work is not a bleeding-edge statement or in-depth review of the entirety of systematics, but covers the basics as broadly as could be handled in a one semester course. Most chapters are designed to be a single 1.5 hour class, with those on parsimony, likelihood, posterior probability, and tree searching two classes (2 x 1.5 hours).




Species


Book Description

In this comprehensive work, John S. Wilkins traces the history of the idea of "species" from antiquity to today, providing a new perspective on the relationship between philosophical and biological approaches.--[book cover].




Systematics, Evolution, and Biogeography of Compositae


Book Description

"This spectacular book does full justice to the Compositae (Asteraceae), the largest and most successful flowering plant family with some 1700 genera and 24,000 species. It is an indispensable reference, providing the most up-to-date hypotheses of phylogenetic relationships in the family based on molecular and morphological characters, along with the corresponding subfamilial and tribal classification. The 2009 work not only integrates the extensive molecular phylogenetic analyses conducted in the last 25 years, but also uses these to produce a metatree for about 900 taxa of Compositae. The book contains 44 chapters, contributed by 80 authors, covering the history, economic importance, character variation, and systematic and phylogenetic diversity of the family. The emphasis of this work is phylogenetic; its chapters provide a detailed, current, and thoroughly documented presentation of the major (and not so major) clades in the family, citing some 2632 references. Like the Compositae, the book is massive, diverse, and fascinating. It is beautifully illustrated, with 170 figures, and an additional 108 cladograms (all consistently color-coded, based on the geographic range of the included taxa); within these figures are displayed 443 color photographs, clearly demonstrating the amazing array of floral and vegetative form expressed by members of the clade." --NHBS Environment Bookstore.




The Evolution of Phylogenetic Systematics


Book Description

The Evolution of Phylogenetic Systematics aims to make sense of the rise of phylogenetic systematics—its methods, its objects of study, and its theoretical foundations—with contributions from historians, philosophers, and biologists. This volume articulates an intellectual agenda for the study of systematics and taxonomy in a way that connects classification with larger historical themes in the biological sciences, including morphology, experimental and observational approaches, evolution, biogeography, debates over form and function, character transformation, development, and biodiversity. It aims to provide frameworks for answering the question: how did systematics become phylogenetic?




Isopod Systematics and Evolution


Book Description

A look at isopod systematics and evolution, topics confronted include the influence of genetic and extrachromasomal factors on their population rate and a comparison of different species in different habitats.




Molecular Systematics and Plant Evolution


Book Description

Molecular Systematics and Plant Evolution discusses the diversity and evolution of plants with a molecular approach. It looks at population genetics, phylogeny (history of evolution) and developmental genetics, to provide a framework from which to understand evolutionary patterns and relationships amongst plants. The international panel of contributors are all respected systematists and evolutionary biologists, who have brought together a wide range of topics from the forefront of research while keeping the text accessible to students. It has been written for senior undergraduates, postgraduates and researchers in the fields of botany, systematics, population / conservation genetics, phylogenetics and evolutionary biology.




Foundations of Systematics and Biogeography


Book Description

Anyone interested in comparative biology or the history of science will find this myth-busting work genuinely fascinating. It draws attention to the seminal studies and important advances that have shaped systematic and biogeographic thinking. It traces concepts in homology and classification from the 19th century to the present through the provision of a unique anthology of scientific writings from Goethe, Agassiz, Owen, Naef, Zangerl and Nelson, among others.




Cladistics


Book Description

Cladistics is the method of choice for systematic classification and comparative studies in all fields of biology. In cladistics, reconstructed genealogies are based on common ancestry rather than on simple anatomical similarity and therefore effectively reveal true phylogenetic relationships. This book is an introduction to cladistics and is based on the popular training course originally offered by the Systematics Association. The book first introduces the principle of parsimony and methods for character coding and the determination of character polarity. Methods of cladistic tree-building follow and tree statistics are detailed. Alternatives to parsimony, molecular applications of cladistics, and the relevance of fossils are then discussed. The concluding chapters review two important topics in cladistics: cladistic biogeography and the implementation of cladistic results in systematics. This book provides an up-to-date account of the techniques of modern cladistics, written in a clear, readable style. It will be an invaluable text for all students interested in systematics and comparative studies.




Phylogenetics


Book Description

The long-awaited revision of the industry standard on phylogenetics Since the publication of the first edition of this landmark volume more than twenty-five years ago, phylogenetic systematics has taken its place as the dominant paradigm of systematic biology. It has profoundly influenced the way scientists study evolution, and has seen many theoretical and technical advances as the field has continued to grow. It goes almost without saying that the next twenty-five years of phylogenetic research will prove as fascinating as the first, with many exciting developments yet to come. This new edition of Phylogenetics captures the very essence of this rapidly evolving discipline. Written for the practicing systematist and phylogeneticist, it addresses both the philosophical and technical issues of the field, as well as surveys general practices in taxonomy. Major sections of the book deal with the nature of species and higher taxa, homology and characters, trees and tree graphs, and biogeography—the purpose being to develop biologically relevant species, character, tree, and biogeographic concepts that can be applied fruitfully to phylogenetics. The book then turns its focus to phylogenetic trees, including an in-depth guide to tree-building algorithms. Additional coverage includes: Parsimony and parsimony analysis Parametric phylogenetics including maximum likelihood and Bayesian approaches Phylogenetic classification Critiques of evolutionary taxonomy, phenetics, and transformed cladistics Specimen selection, field collecting, and curating Systematic publication and the rules of nomenclature Providing a thorough synthesis of the field, this important update to Phylogenetics is essential for students and researchers in the areas of evolutionary biology, molecular evolution, genetics and evolutionary genetics, paleontology, physical anthropology, and zoology.




Systematics and Evolution


Book Description

Mycology, the study of fungi, originated as a subdiscipline of botany and was a des criptive discipline, largely neglected as an experimental science until the early years of this century. A seminal paper by Blakeslee in 1904 provided evidence for self incompatibility, termed "heterothallism", and stimulated interest in studies related to the control of sexual reproduction in fungi by mating-type specificities. Soon to follow was the demonstration that sexually reproducing fungi exhibit Mendelian inheritance and that it was possible to conduct formal genetic analysis with fungi. The names Burgetf, Kniep and Lindegren are all associated with this early period of fungal genet ics research. These studies and the discovery of penicillin by Fleming, who shared a Nobel Prize in 1945, provided further impetus for experimental research with fungi. Thus began a period of interest in mutation induction and analysis of mutants for biochemical traits. Such fundamental research, conducted largely with Neurospora crassa, led to the one gene: one enzyme hypothesis and to a second Nobel Prize for fungal research awarded to Beadle and Tatum in 1958. Fundamental research in biochemical genetics was extended to other fungi, especially to Saccharomyces cerevisiae, and by the mid-1960s fungal systems were much favored for studies in eukaryotic molecular biology and were soon able to compete with bacterial systems in the molecular arena.