Analysis and Modeling of Coordinated Multi-neuronal Activity


Book Description

Since information in the brain is processed by the exchange of spikes among neurons, a study of such group dynamics is extremely important in understanding hippocampus dependent memory. These spike patterns and local field potentials (LFPs) have been analyzed by various statistical methods. These studies have led to important findings of memory information processing. For example, memory-trace replay, a reactivation of behaviorally induced neural patterns during subsequent sleep, has been suggested to play an important role in memory consolidation. It has also been suggested that a ripple/sharp wave event (one of the characteristics of LFPs in the hippocampus) and spiking activity in the cortex have a specific relationship that may facilitate the consolidation of hippocampal dependent memory from the hippocampus to the cortex. The book will provide a state-of-the-art finding of memory information processing through the analysis of multi-neuronal data. The first half of the book is devoted to this analysis aspect. Understanding memory information representation and its consolidation, however, cannot be achieved only by analyzing the data. It is extremely important to construct a computational model to seek an underlying mathematical principle. In other words, an entire picture of hippocampus dependent memory system would be elucidated through close collaboration among experiments, data analysis, and computational modeling. Not only does computational modeling benefit the data analysis of multi-electrode recordings, but it also provides useful insight for future experiments and analyses. The second half of the book will be devoted to the computational modeling of hippocampus-dependent memory.




Dynamic Neuroscience


Book Description

This book shows how to develop efficient quantitative methods to characterize neural data and extra information that reveals underlying dynamics and neurophysiological mechanisms. Written by active experts in the field, it contains an exchange of innovative ideas among researchers at both computational and experimental ends, as well as those at the interface. Authors discuss research challenges and new directions in emerging areas with two goals in mind: to collect recent advances in statistics, signal processing, modeling, and control methods in neuroscience; and to welcome and foster innovative or cross-disciplinary ideas along this line of research and discuss important research issues in neural data analysis. Making use of both tutorial and review materials, this book is written for neural, electrical, and biomedical engineers; computational neuroscientists; statisticians; computer scientists; and clinical engineers.




Representation in the Brain


Book Description

This eBook contains ten articles on the topic of representation of abstract concepts, both simple and complex, at the neural level in the brain. Seven of the articles directly address the main competing theories of mental representation – localist and distributed. Four of these articles argue – either on a theoretical basis or with neurophysiological evidence – that abstract concepts, simple or complex, exist (have to exist) at either the single cell level or in an exclusive neural cell assembly. There are three other papers that argue for sparse distributed representation (population coding) of abstract concepts. There are two other papers that discuss neural implementation of symbolic models. The remaining paper deals with learning of motor skills from imagery versus actual execution. A summary of these papers is provided in the Editorial.




Goal-Directed Decision Making


Book Description

Goal-Directed Decision Making: Computations and Neural Circuits examines the role of goal-directed choice. It begins with an examination of the computations performed by associated circuits, but then moves on to in-depth examinations on how goal-directed learning interacts with other forms of choice and response selection. This is the only book that embraces the multidisciplinary nature of this area of decision-making, integrating our knowledge of goal-directed decision-making from basic, computational, clinical, and ethology research into a single resource that is invaluable for neuroscientists, psychologists and computer scientists alike. The book presents discussions on the broader field of decision-making and how it has expanded to incorporate ideas related to flexible behaviors, such as cognitive control, economic choice, and Bayesian inference, as well as the influences that motivation, context and cues have on behavior and decision-making. - Details the neural circuits functionally involved in goal-directed decision-making and the computations these circuits perform - Discusses changes in goal-directed decision-making spurred by development and disorders, and within real-world applications, including social contexts and addiction - Synthesizes neuroscience, psychology and computer science research to offer a unique perspective on the central and emerging issues in goal-directed decision-making




Closed Loop Neuroscience


Book Description

Closed Loop Neuroscience addresses the technical aspects of closed loop neurophysiology, presenting the implementation of these approaches spanning several domains of neuroscience, from cellular and network neurophysiology, through sensory and motor systems, and then clinical therapeutic devices. Although closed-loop approaches have long been a part of the neuroscientific toolbox, these techniques are only now gaining popularity in research and clinical applications. As there is not yet a comprehensive methods book addressing the topic as a whole, this volume fills that gap, presenting state-of-the-art approaches and the technical advancements that enable their application to different scientific problems in neuroscience. - Presents the first volume to offer researchers a comprehensive overview of the technical realities of employing closed loop techniques in their work - Offers application to in-vitro, in-vivo, and hybrid systems - Contains an emphasis on the actual techniques used rather than on specific results obtained - Includes exhaustive protocols and descriptions of software and hardware, making it easy for readers to implement the proposed methodologies - Encompasses the clinical/neuroprosthetic aspect and how these systems can also be used to contribute to our understanding of basic neurophysiology - Edited work with chapters authored by leaders in the field from around the globe – the broadest, most expert coverage available




Statistical analysis of multi-cell recordings: linking population coding models to experimental data


Book Description

Modern recording techniques such as multi-electrode arrays and 2-photon imaging are capable of simultaneously monitoring the activity of large neuronal ensembles at single cell resolution. This makes it possible to study the dynamics of neural populations of considerable size, and to gain insights into their computations and functional organization. The key challenge with multi-electrode recordings is their high-dimensional nature. Understanding this kind of data requires powerful statistical techniques for capturing the structure of the neural population responses and their relation with external stimuli or behavioral observations. Contributions to this Research Topic should advance statistical modeling of neural populations. Questions of particular interest include: 1. What classes of statistical methods are most useful for modeling population activity? 2. What are the main limitations of current approaches, and what can be done to overcome them? 3. How can statistical methods be used to empirically test existing models of (probabilistic) population coding? 4. What role can statistical methods play in formulating novel hypotheses about the principles of information processing in neural populations? This Research Topic is connected to a one day workshop at the Computational Neuroscience Meeting 2009 in Berlin (http://www.cnsorg.org/2009/workshops.shtml and http://www.kyb.tuebingen.mpg.de/bethge/workshops/cns2009/)







Towards an Integrated Approach to Measurement, Analysis and Modeling of Cortical Networks


Book Description

The amount of data being produced by neuroscientists is increasing rapidly, driven by advances in neuroimaging and recording techniques spanning multiple scales of resolution. The availability of such data poses significant challenges for their processing and interpretation. To gain a deeper understanding of the surrounding issues, the Editors of this e-Book reached out to an interdisciplinary community, and formed the Cortical Networks Working Group, and the genesis of this e-Book thus began with the formation of this Working Group, which was supported by the National Institute for Mathematical and Biological Synthesis in the USA. The Group consisted of scientists from neuroscience, physics, psychology and computer science, and meetings were held in person. (A detailed list of the group members is presented in the Editorial that follows.) At the time we started, in 2010, the term “big data” was hardly in existence, though the volume of data we were handling would certainly have qualified. Furthermore, there was significant interest in harnessing the power of supercomputers to perform large scale neuronal simulations, and in creating specialized hardware to mimic neural function. We realized that the various disciplines represented in our Group could and should work together to accelerate progress in Neuroscience. We searched for common threads that could define the foundation for an integrated approach to solve important problems in the field. We adopted a network-centric perspective to address these challenges, as the data are derived from structures that are themselves network-like. We proposed three inter-twined threads, consisting of measurement of neural activity, analysis of network structures deduced from this activity, and modeling of network function, leading to theoretical insights. This approach formed the foundation of our initial call for papers. When we issued the call for papers, we were not sure how many papers would fall into each of these threads. We were pleased that we found significant interest in each thread, and the number of submissions exceeded our expectations. This is an indication that the field of neuroscience is ripe for the type of integration and interchange that we had anticipated. We first published a special topics issue after we received a sufficient number of submissions. This is now being converted to an e-book to strengthen the coherence of its contributions. One of the strong themes emerging in this e-book is that network-based measures capture better the dynamics of brain processes, and provide features with greater discriminative power than point-based measures. Another theme is the importance of network oscillations and synchrony. Current research is shedding light on the principles that govern the establishment and maintenance of network oscillation states. These principles could explain why there is impaired synchronization between different brain areas in schizophrenics and Parkinson’s patients. Such research could ultimately provide the foundation for an understanding of other psychiatric and neurodegenerative conditions. The chapters in this book cover these three main threads related to cortical networks. Some authors have combined two or more threads within a single chapter. We expect the availability of related work appearing in a single e-book to help our readers see the connection between different research efforts, and spur further insights and research.




Advances in Intelligent Data Analysis XI


Book Description

This book constitutes the refereed proceedings of the 11th International Conference on Intelligent Data Analysis, IDA 2012, held in Helsinki, Finland, in October 2012. The 32 revised full papers presented together with 3 invited papers were carefully reviewed and selected from 88 submissions. All current aspects of intelligent data analysis are addressed, including intelligent support for modeling and analyzing data from complex, dynamical systems. The papers focus on novel applications of IDA techniques to, e.g., networked digital information systems; novel modes of data acquisition and the associated issues; robustness and scalability issues of intelligent data analysis techniques; and visualization and dissemination results.




Analysis and Modeling of Neural Systems


Book Description

I - Analysis and Modeling Tools and Techniques.- Section 1: Analysis.- Assembly Connectivity and Activity: Methods, Results, Interpretations.- Visualization of Cortical Connections With Voltage Sensitive Dyes.- Channels, Coupling, and Synchronized Rhythmic Bursting Activity.- Sparse-stimulation and Wiener Kernels.- Quantitative Search for Stimulus-Specific Patterns in the Human Electroencephalogram (EEG) During a Somatosensory Task.- Section 2: Modeling.- Functional Insights About Synaptic Inputs to Dendrites.- Dendritic Control of Hebbian Computations.- Low Threshold Spikes and Rhythmic Oscil.