Cellular Automata


Book Description

Cellular automata make up a class of completely discrete dynamical systems, which have became a core subject in the sciences of complexity due to their conceptual simplicity, easiness of implementation for computer simulation, and their ability to exhibit a wide variety of amazingly complex behavior. The feature of simplicity behind complexity of cellular automata has attracted the researchers' attention from a wide range of divergent fields of study of science, which extend from the exact disciplines of mathematical physics up to the social ones, and beyond. Numerous complex systems containing many discrete elements with local interactions have been and are being conveniently modelled as cellular automata. In this book, the versatility of cellular automata as models for a wide diversity of complex systems is underlined through the study of a number of outstanding problems using these innovative techniques for modelling and simulation.




Systems Biology


Book Description

Growth in the pharmaceutical market has slowed down – almost to a standstill. One reason is that governments and other payers are cutting costs in a faltering world economy. But a more fundamental problem is the failure of major companies to discover, develop and market new drugs. Major drugs losing patent protection or being withdrawn from the market are simply not being replaced by new therapies – the pharmaceutical market model is no longer functioning effectively and most pharmaceutical companies are failing to produce the innovation needed for success. This multi-authored new book looks at a vital strategy which can bring innovation to a market in need of new ideas and new products: Systems Biology (SB). Modeling is a significant task of systems biology. SB aims to develop and use efficient algorithms, data structures, visualization and communication tools to orchestrate the integration of large quantities of biological data with the goal of computer modeling. It involves the use of computer simulations of biological systems, such as the networks of metabolites comprise signal transduction pathways and gene regulatory networks to both analyze and visualize the complex connections of these cellular processes. SB involves a series of operational protocols used for performing research, namely a cycle composed of theoretical, analytic or computational modeling to propose specific testable hypotheses about a biological system, experimental validation, and then using the newly acquired quantitative description of cells or cell processes to refine the computational model or theory.




Models and Algorithms for Biomolecules and Molecular Networks


Book Description

By providing expositions to modeling principles, theories, computational solutions, and open problems, this reference presents a full scope on relevant biological phenomena, modeling frameworks, technical challenges, and algorithms. Up-to-date developments of structures of biomolecules, systems biology, advanced models, and algorithms Sampling techniques for estimating evolutionary rates and generating molecular structures Accurate computation of probability landscape of stochastic networks, solving discrete chemical master equations End-of-chapter exercises




Systems Biology of Apoptosis


Book Description

Systems Biology of Apoptosis summarizes all current achievements in this emerging field. Apoptosis is a process common to all multicellular organisms. Apoptosis leads to the elimination of cells via a complex but highly defined cellular programme. Defects in the regulation of apoptosis result in serious diseases such as cancer, autoimmunity, AIDS and neurodegeneration. Recently, a substantial step forward in understanding the complex apoptotic pathways has been made by utilising systems biology approaches. Systems biology combines rigorous mathematical modelling with experimental approaches in a closed loop cycle for advancing our knowledge about complex biological processes. In this book, the editor describes the contemporary systems biology studies devoted to apoptotic signaling and focuses on the question how systems biology helps to understand life/death decisions made in the cell and to develop new approaches to rational treatment strategies.




Tools and Techniques in Biomolecular Science


Book Description

This book reviews the theoretical concepts and experimental details underpinning the broad range of modern technologies that are currently being used to advance our understanding of the biomolecular sciences.




Lattice-Gas Cellular Automata


Book Description

A self-contained, comprehensive introduction to the theory of hydrodynamic lattice gases.




Artificial Intelligence XXXIV


Book Description

This book constitutes the proceedings of the 37th SGAI International Conference on Innovative Techniques and Applications of Artificial Intelligence, AI 2017, held in Cambridge, UK, in December 2017. The 25 full papers and 12 short papers presented in this volume were carefully reviewed and selected from 55 submissions. There are technical and application papers which were organized in topical sections named: machine learning and neural networks; machine learning, speech and vision and fuzzy logic; short technical papers; AI for healthcare; applications of machine learning; applications of neural networks and fuzzy logic; case-based reasoning; AI techniques; and short applications papers.




Algebraic Biology


Book Description

"This volume constitutes the refereed proceedings of the Second International Conference on Algebraic Biology, held at the Castle of Hagenberg, Austria in July 2007. The conference was run as part of the Research Institute for Symbolic Computation (RISC) Summer 2007. Nineteen full papers are presented, together with three invited papers and four tutorials. Each paper has been carefully reviewed by the book's team of expert editors to ensure each one meets the highest standards of research and scholarship. The conference served as an interdisciplinary forum for the presentation of research on all aspects of the application of symbolic computation in biology, including computer algebra, computational logic, and related methods. Papers also examine solutions to problems in biology using symbolic methods."--Publisher's website.




Emergent Computation


Book Description

This book is dedicated to Professor Selim G. Akl to honour his groundbreaking research achievements in computer science over four decades. The book is an intellectually stimulating excursion into emergent computing paradigms, architectures and implementations. World top experts in computer science, engineering and mathematics overview exciting and intriguing topics of musical rhythms generation algorithms, analyse the computational power of random walks, dispelling a myth of computational universality, computability and complexity at the microscopic level of synchronous computation, descriptional complexity of error detection, quantum cryptography, context-free parallel communicating grammar systems, fault tolerance of hypercubes, finite automata theory of bulk-synchronous parallel computing, dealing with silent data corruptions in high-performance computing, parallel sorting on graphics processing units, mining for functional dependencies in relational databases, cellular automata optimisation of wireless sensors networks, connectivity preserving network transformers, constrained resource networks, vague computing, parallel evolutionary optimisation, emergent behaviour in multi-agent systems, vehicular clouds, epigenetic drug discovery, dimensionality reduction for intrusion detection systems, physical maze solvers, computer chess, parallel algorithms to string alignment, detection of community structure. The book is a unique combination of vibrant essays which inspires scientists and engineers to exploit natural phenomena in designs of computing architectures of the future.




Artificial Life Models in Software


Book Description

An informal introduction and guidance to modern software tools for modeling and simulation of life-like phenomena, this book offers detailed reviews of contemporary software for artificial life for both professionals and amateurs.