The Molecular Biology of Chloroplasts and Mitochondria in Chlamydomonas


Book Description

Provides a thorough overview of current research with the green alga Chlamydomonas on chloroplast and mitochondrial biogenesis and function, with an emphasis on the assembly and structure-function relationships of the constituents of the photosynthetic apparatus. Contributions emphasize the multidisciplinary nature of current research in photosynthesis, combining molecular genetics, biochemical, biophysical, and physiological approaches. The 36 articles address topics including nuclear genome organization; RNA stability and processing; splicing; translation; protein targeting in the chloroplast; photosystems; pigments; glycerolipids; the ATP synthase; and ferrodoxin and thioredoxin. Further contributions address new measurements methods for photosynthetic activity in vivo; starch biosynthesis; the responses of Chlamydomonas to various stress conditions; nitrogen assimilation; and mitochondrial genetics. Annotation copyrighted by Book News, Inc., Portland, OR




Chlamydomonas: Molecular Genetics and Physiology


Book Description

This Microbiology Monographs volume covers the current and most recent advances in genomics and genetics, biochemistry, physiology, and molecular biology of C. reinhardtii. Expert international scientists contribute with reviews on the genome, post-genomic techniques, the genetic toolbox development as well as new insights in regulation of photosynthesis and acclimation strategies towards environmental stresses and other structural and genetic aspects, including applicable aspects in biotechnology and biomedicine. Powerful new strategies in functional genomic and genetics combined with biochemical and physiological analyses revealed new insights into Chlamydomonas biology.




The Chlamydomonas Sourcebook: Introduction to Chlamydomonas and Its Laboratory Use


Book Description

Dr. Harris has played a major role in the development of this organism as a model system. Her previous version of the Chlamydomonas Sourcebook which published in 1989, has been a classic in the field and is considered required reading for anyone working with this organism. This latest edition has been expanded to include three volumes providing molecular techniques, analysis of the recently sequenced genome, and reviews of the current status of the diverse fields in which Chlamydomonas is used as a model organism. Methods for Chlamydomonas research and best practices for applications in research, including methods for culture, preservation of cultures, preparation of media, lists of inhibitors and other additives to culture media, are included. Additions to this volume also include help with common laboratory problems such as contamination, student demonstrations, and properties of particular strains and mutants. This volume is part of a 3-Volume Set (ISBN: 978-0-12-370873-1) and is also sold individually. - Expanded revision of gold standard reference - Includes latest advances in research, including completion of the genome - Provides broad perspective with studies in cell and molecular biology, genetics, plant physiology and related fields - Available as part of a 3-Volume Set or sold individually




The Chlamydomonas Sourcebook


Book Description

The Chlamydomonas Sourcebook, 3rd Edition Introduction to Chlamydomonas and Its Laboratory Use (Volume 1) The gold-standard reference?covering the basic biology of the Chlamydomonas alga and techniques for its laboratory analysis Originally published as the standalone Chlamydomonas Sourcebook, then expanded as the first volume in a three-part comprehensive gold-standard reference,?The Chlamydomonas Sourcebook: Introduction to Chlamydomonas and Its Laboratory Use?has been fully revised and updated to include a?wealth of new resources for the Chlamydomonas community. Early chapters cover current understandings of its taxonomy, ultrastructure, cell and life cycles, and nuclear and organelle genomes, followed by technique-oriented chapters covering such topics as cell culture, mutagenesis, genetic analysis, construction of mutant libraries, and protein localization using immunofluorescence. This volume presents the latest in research and best practices, making it a must-have resource for researchers and students working in plant science and photosynthesis, fertility, mammalian vision, and biochemistry; crop scientists; plant physiologists; and plant, molecular, and human disease biologists. - Remains the only complete reference to provide both the historical background and the most up-to-date information and applications on Chlamydomonas - Includes best practices for applications in research, including methods for culture, genetic analysis, genomic and transcriptomic analysis, and mutant screening - Helps researchers solve common laboratory problems, provides details on the properties of particular strains, and offers a comprehensive survey of molecular approaches - Provides a broad perspective for studies in cell and molecular biology, genetics, plant physiology, and related fields




Cilia and Flagella


Book Description

Cilia and Flagella presents protocols accessible to all individuals working with eukaryotic cilia and flagella. These recipes delineate laboratory methods and reagents, as well as critical steps and pitfalls of the procedures. The volume covers the roles of cilia and flagella in cell assembly and motility, the cell cycle, cell-cell recognition and other sensory functions, as well as human diseases and disorders. Students, researchers, professors, and clinicians should find the book's combination of "classic" and innovative techniques essential to the study of cilia and flagella.Key Features* A complete guide containing more than 80 concise technical chapters friendly to both the novice and experienced researcher* Covers protocols for cilia and flagella across systems and species from Chlamydomonas and Euglena to mammals* Both classic and state-of-the-art methods readily adaptable across model systems, and designed to last the test of time, including microscopy, electrophoresis, and PCR* Relevant to clinicians interested in respiratory disease, male infertility, and other syndromes, who need to learn biochemical, molecular, and genetic approaches to studying cilia, flagella, and related structures




The Chlamydomonas Sourcebook


Book Description

The Chlamydomonas Sourcebook, 3rd Edition Cell Motility and Behavior (Volume 3) The gold-standard reference?introducing this multidisciplinary science,?fully revised and updated with the latest discoveries Originally published as the standalone Chlamydomonas Sourcebook, then expanded as the third volume in a three-part comprehensive gold-standard reference,?The Chlamydomonas Sourcebook: Cell Motility and Behavior has been fully revised and updated to include the wealth of new resources for the Chlamydomonas community. Reflecting the significant advancement in?the understanding of the role of basal bodies and cilia play in human diseases, this volume employs quantitative proteomics and mass spectroscopy as well as?cryo?EM tomography and single particle?cryo?EM. Other topics such as current insights?on?mitosis and cytokinesis, ciliary assembly and motility, intraflagellar?transport, and more help build an understanding of human diseases of the cilium. Cell Motility and Behavior presents the latest in research and best practices, making this a must-have resource for researchers and students working in plant science and photosynthesis, fertility, mammalian vision, and biochemistry; crop scientists; plant physiologists; and plant, molecular, and human disease biologists. Provides an essential reference to a model species for the study of mechanisms of motility in free living cells? Includes methods for Chlamydomonas motility research? Includes a table listing the known proteins (with NCBI accession numbers) for each structure discussed, and the known mutations that affect each structure and process




Oxygenic Photosynthesis: The Light Reactions


Book Description

Structure and function of the components of the photosynthetic apparatus and the molecular biology of these components have become the dominant themes in advances in our understanding of the light reactions of oxygenic photosynthesis. Oxygenic Photosynthesis: The Light Reactions presents our current understanding of these reactions in thylakoid membranes. Topics covered include the photosystems, the cytochrome b6-f complex, plastocyanin, ferredoxin, FNR, light-harvesting complexes, and the coupling factor. Chapters are also devoted to the structure of thylakoid membranes, their lipid composition, and their biogenesis. Updates on the crystal structures of cytochrome f, ATP synthase and photosystem I are presented and a section on molecular biology and evolution of the photosynthetic apparatus is also included. The chapters in this book provide a comprehensive overview of photosynthetic reactions in eukaryotic thylakoids. The book is intended for a wide audience, including graduate students and researchers active in this field, as well as those individuals who have interests in plant biochemistry and molecular biology or plant physiology.




Photosynthesis in Algae: Biochemical and Physiological Mechanisms


Book Description

Algae, including cyanobacteria, are in the spotlight today for a number of reasons; firstly it has become abundantly clear over recent years that algae have been neglected in terms of basic research and that knowledge gap is being rapidly closed with the establishment of some surprising discoveries, such as the presence of Near-Infra-Red-Absorbing cyanobacteria and a wealth of natural products; secondly molecular approaches have provided a wealth of approaches to genetically modify algae and produce value-added products; thirdly it has become clear just how important, marine phytoplankton is to global carbon capture and the production of food globally; and fourthly, it has also become clear that algae present unparalleled opportunities to generate biofuels in a sustainable and non-polluting way. This volume presents 15 chapters by world experts on their subjects, ranging from reviews of algal diversity and genetics to in-depth reviews of special algal groups such as diatoms (which account for over 30% of marine carbon capture). Other chapters chart the ways in which this carbon capture occurs or how there are a multiplicity of ways in which algae intercept sun light and deploy this energy for carbon capture. A fascinating aspect here is the way in which sun light is harvested. A special chapter is devoted to the very recent and exciting possibility that algae use coherent light energy transformation to enhance the efficiency of light capture, an aspect of quantum physics that has implications for future developments at several levels and a variety of industries. Just how and why algae use Chlorophyll a as the major light capture pigment is discussed in several chapters. However, attention is also given to those cyanobacteria, which have been found to use the special Near-Infra Red absorbing chlorophylls mentioned above. And attention is also given to those algae that employ phycobiliproteins to fill in the “green window”, i.e., the spectral region from 400 – 650 nm, which is not efficiently covered by chlorophyll and carotenoid pigments. Photoinhibition and photoprotection is the subject area of several chapters and one which it is essential to understand a we work towards greater efficiency of algal photosynthesis. A final chapter is devoted to understanding the molecular basis for coral bleaching, a much-neglected area that is essential in trying to come up with solutions to this very worrying phenomenon, caused by global warming and ocean acidification. This is a book for research scientists, environmentalists, planners in a range of areas including those of marine resources, nutrient control and pollution of water bodies and that growing body of concerned citizens interested in controlling carbon emissions and global warming. Special attention has been given to generating a set of articles that will be read by university students, informed laymen and all those whose wish to understand the rapid changes that have come about in our knowledge of algae over the past decade.




Photosynthesis in Algae


Book Description

This book introduces the reader to algal diversity as currently understood and then traces the photosynthetic structures and mechanisms that contribute so much to making the algae unique. Indeed the field is now so large that no one expert can hope to cover it all. The 19 articles are each written by experts in their area; ranging over all the essential aspects and making for a comprehensive coverage of the whole field. Important developments in molecular biology, especially transformation mutants in Chlamydomonas, are dealt with, as well as areas important to global climate change, carbon dioxide exchange, light harvesting, energy transduction, biotechnology and many others. The book is intended for use by graduate students and beginning researchers in the areas of molecular and cell biology, integrative biology, plant biology, biochemistry and biophysics, biotechnology, global ecology, and phycology.




The Chlamydomonas Sourcebook


Book Description

Originally published as the stand-alone Chlamydomonas Sourcebook, then expanded as the second volume in a three-part comprehensive gold-standard reference, The Chlamydomonas Sourcebook: Organellar and Metabolic Processes has been fully revised and updated to include a wealth of new knowledge and resources for the Chlamydomonas community. It details the tremendous progress recently made with respect to imaging the ultrastructure of cells, dissecting acclimation and biosynthetic responses, and elucidating molecular processes underlying the biology of organelles. In particular, this volume includes exciting new developments in the use of imaging technologies for examining supramolecular organization of the chloroplast, defining mechanisms of branched electron transfer pathways in photosynthesis, dissecting the organization of pyrenoids and CO2 concentration mechanisms, presenting the intricacies associated with acclimation to environmental conditions and providing new insights into dark metabolism and the network of fermentative metabolism. This book thus presents the latest advances in both the research and uses of new experimental approaches and technologies, making this a must-have resource for researchers and students working in plant science and photosynthesis, fertility, mammalian vision, aspects of human disease, acclimation to environmental change, and the biogenesis of cellular complexes. - Describes molecular techniques, analysis of the recently sequenced genome, reviews of the current status of the diverse fields in which Chlamydomonas is used as a model organism - Provides methods for Chlamydomonas research and best practices for their applications; this includes methods for cell culture, preservation of cultures, preparation of media, lists of inhibitors, and other additives to culture media, classical genetic manipulation, and new approaches for gene transfer and editing technologies - Assists researchers with common laboratory problems such as contamination