Distributed, High-Performance and Grid Computing in Computational Biology


Book Description

The book constitutes the refereed proceedings of the International Workshop on Distributed, High-Performance and Grid Computing in Computational Biology, GCCB 2006, held in Eilat, Israel in January 2007 in conjunction with the 5th European Conference on Computational Biology, ECCB 2006. The 13 revised full papers presented were carefully reviewed and selected from many high quality submissions.




Parallel Computing for Bioinformatics and Computational Biology


Book Description

Discover how to streamline complex bioinformatics applications with parallel computing This publication enables readers to handle more complex bioinformatics applications and larger and richer data sets. As the editor clearly shows, using powerful parallel computing tools can lead to significant breakthroughs in deciphering genomes, understanding genetic disease, designing customized drug therapies, and understanding evolution. A broad range of bioinformatics applications is covered with demonstrations on how each one can be parallelized to improve performance and gain faster rates of computation. Current parallel computing techniques and technologies are examined, including distributed computing and grid computing. Readers are provided with a mixture of algorithms, experiments, and simulations that provide not only qualitative but also quantitative insights into the dynamic field of bioinformatics. Parallel Computing for Bioinformatics and Computational Biology is a contributed work that serves as a repository of case studies, collectively demonstrating how parallel computing streamlines difficult problems in bioinformatics and produces better results. Each of the chapters is authored by an established expert in the field and carefully edited to ensure a consistent approach and high standard throughout the publication. The work is organized into five parts: * Algorithms and models * Sequence analysis and microarrays * Phylogenetics * Protein folding * Platforms and enabling technologies Researchers, educators, and students in the field of bioinformatics will discover how high-performance computing can enable them to handle more complex data sets, gain deeper insights, and make new discoveries.




Applications and Developments in Grid, Cloud, and High Performance Computing


Book Description

"This book provides insight into the current trends and emerging issues by investigating grid and cloud evolution, workflow management, and the impact new computing systems have on the education fields as well as the industries"--Provided by publisher.




Grid Computing


Book Description

Unter "Grid Computing" versteht man die gleichzeitige Nutzung vieler Computer in einem Netzwerk für die Lösung eines einzelnen Problems. Grundsätzliche Aspekte und anwendungsbezogene Details zu diesem Gebiet finden Sie in diesem Band. - Grid Computing ist ein viel versprechender Trend, denn man kann damit (1) vorhandene Computer-Ressourcen kosteneffizient nutzen, (2) Probleme lösen, für die enorme Rechenleistungen erforderlich sind, und (3) Synergieeffekte erzielen, auch im globalen Maßstab - Ansatz ist in Forschung und Industrie (IBM, Sun, HP und andere) zunehmend populär (aktuelles Beispiel: Genomforschung) - Buch deckt Motivationen zur Einführung von Grids ebenso ab wie technologische Grundlagen und ausgewählte Beispiele für moderne Anwendungen




Grid and Cloud Database Management


Book Description

Since the 1990s Grid Computing has emerged as a paradigm for accessing and managing distributed, heterogeneous and geographically spread resources, promising that we will be able to access computer power as easily as we can access the electric power grid. Later on, Cloud Computing brought the promise of providing easy and inexpensive access to remote hardware and storage resources. Exploiting pay-per-use models and virtualization for resource provisioning, cloud computing has been rapidly accepted and used by researchers, scientists and industries. In this volume, contributions from internationally recognized experts describe the latest findings on challenging topics related to grid and cloud database management. By exploring current and future developments, they provide a thorough understanding of the principles and techniques involved in these fields. The presented topics are well balanced and complementary, and they range from well-known research projects and real case studies to standards and specifications, and non-functional aspects such as security, performance and scalability. Following an initial introduction by the editors, the contributions are organized into four sections: Open Standards and Specifications, Research Efforts in Grid Database Management, Cloud Data Management, and Scientific Case Studies. With this presentation, the book serves mostly researchers and graduate students, both as an introduction to and as a technical reference for grid and cloud database management. The detailed descriptions of research prototypes dealing with spatiotemporal or genomic data will also be useful for application engineers in these fields.




User Centered Design for Medical Visualization


Book Description

"This book features a comprehensive review of advances in medical visualization and human-computer interaction. It investigates the human roles during a visualization process, specifically motivation-based design, user-based design, and perception-and-cognitive-based design. It also provides real-world examples and insight into the analytical and architectural aspects of user centered design"--Provided by publisher.




Grid Computing for Bioinformatics and Computational Biology


Book Description

The only single, up-to-date source for Grid issues in bioinformatics and biology Bioinformatics is fast emerging as an important discipline for academic research and industrial applications, creating a need for the use of Grid computing techniques for large-scale distributed applications. This book successfully presents Grid algorithms and their real-world applications, provides details on modern and ongoing research, and explores software frameworks that integrate bioinformatics and computational biology. Additional coverage includes: * Bio-ontology and data mining * Data visualization * DNA assembly, clustering, and mapping * Molecular evolution and phylogeny * Gene expression and micro-arrays * Molecular modeling and simulation * Sequence search and alignment * Protein structure prediction * Grid infrastructure, middleware, and tools for bio data Grid Computing for Bioinformatics and Computational Biology is an indispensable resource for professionals in several research and development communities including bioinformatics, computational biology, Grid computing, data mining, and more. It also serves as an ideal textbook for undergraduate- and graduate-level courses in bioinformatics and Grid computing.




Languages, Methodologies and Development Tools for Multi-Agent Systems


Book Description

This book constitutes the thoroughly refereed post-workshop proceedings of the First International Workshop on Languages, Methodologies and Development Tools for Multi-Agent Systems, LADS 2007, held in Durham, UK, in September 2007. The workshop was part of MALLOW 2007, a federation of workshops on Multi-Agent Logics, Languages, and Organizations. The 15 revised full papers, presented together with 1 invited paper reporting the aims and achievements of the OpenKnowledge project, were carefully reviewed and selected from 32 submissions. The papers are organized in topical sections on agent reasoning and semantics, declarative languages and technologies, methodologies and design, and development frameworks.




Future Application and Middleware Technology on e-Science


Book Description

Future Application and Middleware Technology on e-Science presents selected papers from the 2008 Korea e-Science All-Hands-Meeting (AHM 2008). Hosted by the Korea Institute of Science and Technology Information, this meeting was designed to bring together developers and users of e-Science applications and enabling information technologies from international and interdisciplinary research communities. The AHM 2008 conference served as a forum for engineers and scientists to present state-of-the-art research and product/tool developments, and to highlight related activities in all fields of e-Science. The works presented in this edited volume bring together cross-disciplinary information on e-Science in one cohesive source. This book is suitable for the professional audience composed of industry researchers and practitioners of e-Science. This volume should also be suitable for advanced-level students in the field.




Declarative Agent Languages and Technologies IX


Book Description

This book constitutes the thoroughly refereed post-proceedings of the 9th International Workshop on Declarative Agent Languages and Technologies, DALT 2011, held in Taipei, Taiwan, in May 2011. The volume contains 6 revised selected presented at DALT 2011, 7 best papers from the DALT series over the years, explaining how the research developed and how it influenced and impacted the community, the state-of-the-art and subsequent work, and two invited papers from the DALT Spring School, which took place in April 2011.