Functional and Shape Data Analysis


Book Description

This textbook for courses on function data analysis and shape data analysis describes how to define, compare, and mathematically represent shapes, with a focus on statistical modeling and inference. It is aimed at graduate students in analysis in statistics, engineering, applied mathematics, neuroscience, biology, bioinformatics, and other related areas. The interdisciplinary nature of the broad range of ideas covered—from introductory theory to algorithmic implementations and some statistical case studies—is meant to familiarize graduate students with an array of tools that are relevant in developing computational solutions for shape and related analyses. These tools, gleaned from geometry, algebra, statistics, and computational science, are traditionally scattered across different courses, departments, and disciplines; Functional and Shape Data Analysis offers a unified, comprehensive solution by integrating the registration problem into shape analysis, better preparing graduate students for handling future scientific challenges. Recently, a data-driven and application-oriented focus on shape analysis has been trending. This text offers a self-contained treatment of this new generation of methods in shape analysis of curves. Its main focus is shape analysis of functions and curves—in one, two, and higher dimensions—both closed and open. It develops elegant Riemannian frameworks that provide both quantification of shape differences and registration of curves at the same time. Additionally, these methods are used for statistically summarizing given curve data, performing dimension reduction, and modeling observed variability. It is recommended that the reader have a background in calculus, linear algebra, numerical analysis, and computation.




Functional Data Analysis


Book Description

Included here are expressions in the functional domain of such classics as linear regression, principal components analysis, linear modelling, and canonical correlation analysis, as well as specifically functional techniques such as curve registration and principal differential analysis. Data arising in real applications are used throughout for both motivation and illustration, showing how functional approaches allow us to see new things, especially by exploiting the smoothness of the processes generating the data. The data sets exemplify the wide scope of functional data analysis; they are drawn from growth analysis, meteorology, biomechanics, equine science, economics, and medicine. The book presents novel statistical technology while keeping the mathematical level widely accessible. It is designed to appeal to students, applied data analysts, and to experienced researchers; and as such is of value both within statistics and across a broad spectrum of other fields. Much of the material appears here for the first time.




Functional Data Analysis with R and MATLAB


Book Description

The book provides an application-oriented overview of functional analysis, with extended and accessible presentations of key concepts such as spline basis functions, data smoothing, curve registration, functional linear models and dynamic systems Functional data analysis is put to work in a wide a range of applications, so that new problems are likely to find close analogues in this book The code in R and Matlab in the book has been designed to permit easy modification to adapt to new data structures and research problems




Statistical Shape and Deformation Analysis


Book Description

Statistical Shape and Deformation Analysis: Methods, Implementation and Applications contributes enormously to solving different problems in patient care and physical anthropology, ranging from improved automatic registration and segmentation in medical image computing to the study of genetics, evolution and comparative form in physical anthropology and biology. This book gives a clear description of the concepts, methods, algorithms and techniques developed over the last three decades that is followed by examples of their implementation using open source software. Applications of statistical shape and deformation analysis are given for a wide variety of fields, including biometry, anthropology, medical image analysis and clinical practice. - Presents an accessible introduction to the basic concepts, methods, algorithms and techniques in statistical shape and deformation analysis - Includes implementation examples using open source software - Covers real-life applications of statistical shape and deformation analysis methods




Applied Functional Data Analysis


Book Description

This book contains the ideas of functional data analysis by a number of case studies. The case studies are accessible to research workers in a wide range of disciplines. Every reader should gain not only a specific understanding of the methods of functional data analysis, but more importantly a general insight into the underlying patterns of thought. There is an associated web site with MATLABr and S?PLUSr implementations of the methods discussed.




Introduction to Functional Data Analysis


Book Description

Introduction to Functional Data Analysis provides a concise textbook introduction to the field. It explains how to analyze functional data, both at exploratory and inferential levels. It also provides a systematic and accessible exposition of the methodology and the required mathematical framework. The book can be used as textbook for a semester-long course on FDA for advanced undergraduate or MS statistics majors, as well as for MS and PhD students in other disciplines, including applied mathematics, environmental science, public health, medical research, geophysical sciences and economics. It can also be used for self-study and as a reference for researchers in those fields who wish to acquire solid understanding of FDA methodology and practical guidance for its implementation. Each chapter contains plentiful examples of relevant R code and theoretical and data analytic problems. The material of the book can be roughly divided into four parts of approximately equal length: 1) basic concepts and techniques of FDA, 2) functional regression models, 3) sparse and dependent functional data, and 4) introduction to the Hilbert space framework of FDA. The book assumes advanced undergraduate background in calculus, linear algebra, distributional probability theory, foundations of statistical inference, and some familiarity with R programming. Other required statistics background is provided in scalar settings before the related functional concepts are developed. Most chapters end with references to more advanced research for those who wish to gain a more in-depth understanding of a specific topic.




Object Oriented Data Analysis


Book Description

Object Oriented Data Analysis is a framework that facilitates inter-disciplinary research through new terminology for discussing the often many possible approaches to the analysis of complex data. Such data are naturally arising in a wide variety of areas. This book aims to provide ways of thinking that enable the making of sensible choices. The main points are illustrated with many real data examples, based on the authors' personal experiences, which have motivated the invention of a wide array of analytic methods. While the mathematics go far beyond the usual in statistics (including differential geometry and even topology), the book is aimed at accessibility by graduate students. There is deliberate focus on ideas over mathematical formulas. J. S. Marron is the Amos Hawley Distinguished Professor of Statistics, Professor of Biostatistics, Adjunct Professor of Computer Science, Faculty Member of the Bioinformatics and Computational Biology Curriculum and Research Member of the Lineberger Cancer Center and the Computational Medicine Program, at the University of North Carolina, Chapel Hill. Ian L. Dryden is a Professor in the Department of Mathematics and Statistics at Florida International University in Miami, has served as Head of School of Mathematical Sciences at the University of Nottingham, and is joint author of the acclaimed book Statistical Shape Analysis.




Statistical Models of Shape


Book Description

The goal of image interpretation is to convert raw image data into me- ingful information. Images are often interpreted manually. In medicine, for example, a radiologist looks at a medical image, interprets it, and tra- lates the data into a clinically useful form. Manual image interpretation is, however, a time-consuming, error-prone, and subjective process that often requires specialist knowledge. Automated methods that promise fast and - jective image interpretation have therefore stirred up much interest and have become a signi?cant area of research activity. Early work on automated interpretation used low-level operations such as edge detection and region growing to label objects in images. These can p- ducereasonableresultsonsimpleimages,butthepresenceofnoise,occlusion, andstructuralcomplexity oftenleadstoerroneouslabelling. Furthermore,- belling an object is often only the ?rst step of the interpretation process. In order to perform higher-level analysis, a priori information must be incor- rated into the interpretation process. A convenient way of achieving this is to use a ?exible model to encode information such as the expected size, shape, appearance, and position of objects in an image. The use of ?exible models was popularized by the active contour model, or ‘snake’ [98]. A snake deforms so as to match image evidence (e.g., edges) whilst ensuring that it satis?es structural constraints. However, a snake lacks speci?city as it has little knowledge of the domain, limiting its value in image interpretation.




Functional and High-Dimensional Statistics and Related Fields


Book Description

This book presents the latest research on the statistical analysis of functional, high-dimensional and other complex data, addressing methodological and computational aspects, as well as real-world applications. It covers topics like classification, confidence bands, density estimation, depth, diagnostic tests, dimension reduction, estimation on manifolds, high- and infinite-dimensional statistics, inference on functional data, networks, operatorial statistics, prediction, regression, robustness, sequential learning, small-ball probability, smoothing, spatial data, testing, and topological object data analysis, and includes applications in automobile engineering, criminology, drawing recognition, economics, environmetrics, medicine, mobile phone data, spectrometrics and urban environments. The book gathers selected, refereed contributions presented at the Fifth International Workshop on Functional and Operatorial Statistics (IWFOS) in Brno, Czech Republic. The workshop was originally to be held on June 24-26, 2020, but had to be postponed as a consequence of the COVID-19 pandemic. Initiated by the Working Group on Functional and Operatorial Statistics at the University of Toulouse in 2008, the IWFOS workshops provide a forum to discuss the latest trends and advances in functional statistics and related fields, and foster the exchange of ideas and international collaboration in the field.




Data Analysis Methods in Physical Oceanography


Book Description

Data Analysis Methods in Physical Oceanography is a practical referenceguide to established and modern data analysis techniques in earth and oceansciences. This second and revised edition is even more comprehensive with numerous updates, and an additional appendix on 'Convolution and Fourier transforms'. Intended for both students and established scientists, the fivemajor chapters of the book cover data acquisition and recording, dataprocessing and presentation, statistical methods and error handling,analysis of spatial data fields, and time series analysis methods. Chapter 5on time series analysis is a book in itself, spanning a wide diversity oftopics from stochastic processes and stationarity, coherence functions,Fourier analysis, tidal harmonic analysis, spectral and cross-spectralanalysis, wavelet and other related methods for processing nonstationarydata series, digital filters, and fractals. The seven appendices includeunit conversions, approximation methods and nondimensional numbers used ingeophysical fluid dynamics, presentations on convolution, statisticalterminology, and distribution functions, and a number of importantstatistical tables. Twenty pages are devoted to references. Featuring:• An in-depth presentation of modern techniques for the analysis of temporal and spatial data sets collected in oceanography, geophysics, and other disciplines in earth and ocean sciences.• A detailed overview of oceanographic instrumentation and sensors - old and new - used to collect oceanographic data.• 7 appendices especially applicable to earth and ocean sciences ranging from conversion of units, through statistical tables, to terminology and non-dimensional parameters. In praise of the first edition: "(...)This is a very practical guide to the various statistical analysis methods used for obtaining information from geophysical data, with particular reference to oceanography(...)The book provides both a text for advanced students of the geophysical sciences and a useful reference volume for researchers." Aslib Book Guide Vol 63, No. 9, 1998 "(...)This is an excellent book that I recommend highly and will definitely use for my own research and teaching." EOS Transactions, D.A. Jay, 1999 "(...)In summary, this book is the most comprehensive and practical source of information on data analysis methods available to the physical oceanographer. The reader gets the benefit of extremely broad coverage and an excellent set of examples drawn from geographical observations." Oceanography, Vol. 12, No. 3, A. Plueddemann, 1999 "(...)Data Analysis Methods in Physical Oceanography is highly recommended for a wide range of readers, from the relative novice to the experienced researcher. It would be appropriate for academic and special libraries." E-Streams, Vol. 2, No. 8, P. Mofjelf, August 1999