Gene Flow


Book Description

"This book discusses gene flow of transgenes from genetically modified organisms into nature, with a focus on monitoring, modelling and mitigation. It includes both scientific reviews and perspectives on gene flow and experimental case studies, for example, gene flow of soyabean and poplar"--




Gene Flow Between Crops and Their Wild Relatives


Book Description

Reviewing the relevant scientific and technical literature, this work summarizes the current state-of-the-art knowledge related to gene flow and introgression (the permanent incorporation of genetic information from one set of differentiated populations into another) between genetically modified crops and their wild relatives. They analyze the biological framework for protecting the genetic integrity of indigenous wild relatives of crops in centers of crop origin and diversity, focusing on the issues of emission, dispersal, and deposition of pollen and/or seed; the likelihood and extent of gene flow from crops to wild relatives; and stabilization and the spread of traits in wild species. The material is organized into crop chapters, each of which covers general biological information of the crop; the most important crop wild relatives together with information about their ploidy levels, diverse genomes, centers of origin, and geographic distribution; the crop's potential for hybridization with its wild relatives; pollen flow studies related to pollen dispersal distances and hybridization rates; the current state of the genetic modification technology regarding that crop; and research gaps. The crop chapters discuss banana and plantain; barley; canola and oilseed rape; cassava, manioc, and yucca; chickpea; common bean; cotton; cowpea; finger millet; maize and corn; oat; peanut and groundnut; pearl millet; pigeonpea; potato; rice; sorghum; soybean; sweet potato, batata, and camote; and wheat and bread wheat.




Population Genetics and Microevolutionary Theory


Book Description

The advances made possible by the development of molecular techniques have in recent years revolutionized quantitative genetics and its relevance for population genetics. Population Genetics and Microevolutionary Theory takes a modern approach to population genetics, incorporating modern molecular biology, species-level evolutionary biology, and a thorough acknowledgment of quantitative genetics as the theoretical basis for population genetics. Logically organized into three main sections on population structure and history, genotype-phenotype interactions, and selection/adaptation Extensive use of real examples to illustrate concepts Written in a clear and accessible manner and devoid of complex mathematical equations Includes the author's introduction to background material as well as a conclusion for a handy overview of the field and its modern applications Each chapter ends with a set of review questions and answers Offers helpful general references and Internet links




Geographical Genetics (MPB-38)


Book Description

Population genetics has made great strides in applying statistical analysis and mathematical modeling to understand how genes mutate and spread through populations over time. But real populations also live in space. Streams, mountains, and other geographic features often divide populations, limit migration, or otherwise influence gene flow. This book rigorously examines the processes that determine geographic patterns of genetic variation, providing a comprehensive guide to their study and interpretation. Geographical Genetics has a unique focus on the mathematical relationships of spatial statistical measures of patterns to stochastic processes. It also develops the probability and distribution theory of various spatial statistics for analysis of population genetic data, detailing exact methods for using various spatial features to make precise inferences about migration, natural selection, and other dynamic forces. The book also reviews the experimental literature on the types of spatial patterns of genetic variation found within and among populations. And it makes an unprecedented strong connection between observed measures of spatial patterns and those predicted theoretically. Along the way, it introduces readers to the mathematics of spatial statistics, applications to specific population genetic systems, and the relationship between the mathematics of space-time processes and the formal theory of geographical genetics. Written by a leading authority, this is the first comprehensive treatment of geographical genetics. It is a much-needed guide to the theory, techniques, and applications of a field that will play an increasingly important role in population biology and ecology.




Ecosystem Consequences of Soil Warming


Book Description

Ecosystem Consequences of Soil Warming: Microbes, Vegetation, Fauna and Soil Biogeochemistry focuses on biotic and biogeochemical responses to warmer soils including plant and microbial evolution. It covers various field settings, such as arctic tundra; alpine meadows; temperate, tropical and subalpine forests; drylands; and grassland ecosystems. Information integrates multiple natural science disciplines, providing a holistic, integrative approach that will help readers understand and forecast future planetwide responses to soil warming. Students and educators will find this book informative for understanding biotic and biogeochemical responses to changing climatic conditions. Scientists from a wide range of disciplines, including soil scientists, ecologists, geneticists, as well as molecular, evolutionary and conservation biologists, will find this book a valuable resource in understanding and planning for warmer climate conditions.




Bioinformatics for Beginners


Book Description

Bioinformatics for Beginners: Genes, Genomes, Molecular Evolution, Databases and Analytical Tools provides a coherent and friendly treatment of bioinformatics for any student or scientist within biology who has not routinely performed bioinformatic analysis. The book discusses the relevant principles needed to understand the theoretical underpinnings of bioinformatic analysis and demonstrates, with examples, targeted analysis using freely available web-based software and publicly available databases. Eschewing non-essential information, the work focuses on principles and hands-on analysis, also pointing to further study options. - Avoids non-essential coverage, yet fully describes the field for beginners - Explains the molecular basis of evolution to place bioinformatic analysis in biological context - Provides useful links to the vast resource of publicly available bioinformatic databases and analysis tools - Contains over 100 figures that aid in concept discovery and illustration




Geographic Variation, Speciation and Clines. (MPB-10), Volume 10


Book Description

Geographic Variation, Speciation and Clines explores the origins and development of geographic variation, divergence, and speciation. In particular it is concerned with genetic divergence as it is usually found on continents, among groups of populations isolated only by distance. Although earlier writers on this topic considered the effects of geography and dispersal, intense geographic differentiation and speciation were thought to require complete isolation. Professor Endler shows how geographic differentiation and speciation may develop in spite of continuous gene flow. Following a review of the diverse and scattered literature on gene flow and population differentiation, the author discusses the relationships among gene flow, dispersal, and migration. He then summarizes the factors which limit the geographic extent of gene flow, and those which allow steep clines to develop in the absence of barriers to gene flow. His analysis draws on examples from the field, experiments, and single- and multiple-locus models. The mechanism and conditions for parapatric speciation are presented: steepening clines, development into hybrid zones, and the evolution of sexual isolation. In the final chapter the author considers the interpretation of natural clines and the associated geographic patterns of subspecies and species.




Species Concepts in Biology


Book Description

Frank E. Zachos offers a comprehensive review of one of today’s most important and contentious issues in biology: the species problem. After setting the stage with key background information on the topic, the book provides a brief history of species concepts from antiquity to the Modern Synthesis, followed by a discussion of the ontological status of species with a focus on the individuality thesis and potential means of reconciling it with other philosophical approaches. More than 30 different species concepts found in the literature are presented in an annotated list, and the most important ones, including the Biological, Genetic, Evolutionary and different versions of the Phylogenetic Species Concept, are discussed in more detail. Specific questions addressed include the problem of asexual and prokaryotic species, intraspecific categories like subspecies and Evolutionarily Significant Units, and a potential solution to the species problem based on a hierarchical approach that distinguishes between ontological and operational species concepts. A full chapter is dedicated to the challenge of delimiting species by means of a discrete taxonomy in a continuous world of inherently fuzzy boundaries. Further, the book outlines the practical ramifications for ecology and evolutionary biology of how we define the species category, highlighting the danger of an apples and oranges problem if what we subsume under the same name (“species”) is in actuality a variety of different entities. A succinct summary chapter, glossary and annotated list of references round out the coverage, making the book essential reading for all biologists looking for an accessible introduction to the historical, philosophical and practical dimensions of the species problem.




Brenner's Encyclopedia of Genetics


Book Description

The explosion of the field of genetics over the last decade, with the new technologies that have stimulated research, suggests that a new sort of reference work is needed to keep pace with such a fast-moving and interdisciplinary field. Brenner's Encyclopedia of Genetics, Second Edition, Seven Volume Set, builds on the foundation of the first edition by addressing many of the key subfields of genetics that were just in their infancy when the first edition was published. The currency and accessibility of this foundational content will be unrivalled, making this work useful for scientists and non-scientists alike. Featuring relatively short entries on genetics topics written by experts in that topic, Brenner's Encyclopedia of Genetics, Second Edition, Seven Volume Set provides an effective way to quickly learn about any aspect of genetics, from Abortive Transduction to Zygotes. Adding to its utility, the work provides short entries that briefly define key terms, and a guide to additional reading and relevant websites for further study. Many of the entries include figures to explain difficult concepts. Key terms in related areas such as biochemistry, cell, and molecular biology are also included, and there are entries that describe historical figures in genetics, providing insights into their careers and discoveries. This 7-volume set represents a 25% expansion from the first edition, with over 1600 articles encompassing this burgeoning field Thoroughly up-to-date, with many new topics and subfields covered that were in their infancy or not inexistence at the time of the first edition. Timely coverage of emergent areas such as epigenetics, personalized genomic medicine, pharmacogenetics, and genetic enhancement technologies Interdisciplinary and global in its outlook, as befits the field of genetics Brief articles, written by experts in the field, which not only discuss, define, and explain key elements of the field, but also provide definition of key terms, suggestions for further reading, and biographical sketches of the key people in the history of genetics




Population Genomics


Book Description

Population genomics has revolutionized various disciplines of biology including population, evolutionary, ecological and conservation genetics, plant and animal breeding, human health, medicine and pharmacology by allowing to address novel and long-standing questions with unprecedented power and accuracy. It employs large-scale or genome-wide genetic information and bioinformatics to address various fundamental and applied aspects in biology and related disciplines, and provides a comprehensive genome-wide perspective and new insights that were not possible before. These advances have become possible due to the development of new and low-cost sequencing and genotyping technologies and novel statistical approaches and software, bioinformatics tools, and models. Population genomics is tremendously advancing our understanding the roles of evolutionary processes, such as mutation, genetic drift, gene flow, and natural selection, in shaping up genetic variation at individual loci and across the genome and populations; improving the assessment of population genetic parameters or processes such as adaptive evolution, effective population size, gene flow, admixture, inbreeding and outbreeding depression, demography, and biogeography; resolving evolutionary histories and phylogenetic relationships of extant, ancient and extinct species; understanding the genomic basis of fitness, adaptation, speciation, complex ecological and economically important traits, and disease and insect resistance; facilitating forensics, genetic medicine and pharmacology; delineating conservation genetic units; and understanding the genetic effects of resource management practices, and assisting conservation and sustainable management of genetic resources. This Population Genomics book discusses the concepts, approaches, applications and promises of population genomics in addressing most of the above fundamental and applied crucial aspects in a variety of organisms from microorganisms to humans. The book provides insights into a range of emerging population genomics topics including population epigenomics, landscape genomics, seascape genomics, paleogenomics, ecological and evolutionary genomics, biogeography, demography, speciation, admixture, colonization and invasion, genomic selection, and plant and animal domestication. This book fills a vacuum in the field and is expected to become a primary reference in Population Genomics world-wide.