Genetics and Regulation of Nitrogen Fixation in Free-Living Bacteria


Book Description

Genetics and Regulation of Nitrogen-Fixing Bacteria This book is the second volume of a seven-volume series, which covers all fields of research related to nitrogen fixation - from basic studies through applied aspects to environmental impacts. Volume II provides a comprehensive and detailed source of information concerning the genetics and regulation of biological nitrogen fixation in free-living prokaryotes. This preface attempts to provide the reader with some insight into how this volume originated, how it was planned, and then how it developed over the several years of its production. Once the editorial team was established, the first job was to decide which of the many free-living diazotrophs that have been subjected to genetic analysis should be included in this volume. Would we need to develop specific criteria for selection or would the organisms, in effect, select themselves? Of course, Klebsiella pneumoniae and Azotobacter vinelandii, which have served (and still serve) as the main model organisms for the genetic analysis of diazotrophy, plus some of the other bacteria described in this volume, did indeed select themselves. However, there was considerable discussion surrounding well-characterized fixing species, like Azorhizobium caulinodans and Herbaspirillum seropedicae, both of which are able to fix atmospheric N under free-living conditions.




Biological Nitrogen Fixation


Book Description

Phylogenetic classification of nitrogen-fixing organisms. Physiology of nitrogen fixation in free-living heterotrophs. Nitrogen fixation by photosynthetic bacteria. Nitrogen fixation in cyanobacteria. Nitrogen fixation by methanogenic bacteria. Associative nitrogen-fixing bacteria. Actinorhizal symbioses. Ecology of bradyrhizobium and rhizobium. The rhizobium infection process. Physiology of nitrogen-fixing legume nodules: compartments, and functions. Hydrogen cycling in symbiotic bacteria. Evolution of nitrogen-fixing symbioses. The rhizobium symbiosis of the nonlegume parasponia. Genetic analysis of rhizobium nodulation. Nodulins in root nodule development. Plant genetics of symbiotic nitrogen fixation. Molecular genetics of bradyrhizobium symbioses. The enzymology of molybdenum-dependent nitrogen fixation. Alternative nitrogen fixation systems. Biochemical genetics of nitrogenase. Regulation of nitrogen fixation genes in free-living and symbiotic bacteria. Isolated iron-molybdenum cofactor of nitrogenase.




Symbiotic Nitrogen Fixation


Book Description

During the past three decades there has been a large amount of research on biological nitrogen fixation, in part stimulated by increasing world prices of nitrogen-containing fertilizers and environmental concerns. In the last several years, research on plant--microbe interactions, and symbiotic and asymbiotic nitrogen fixation has become truly interdisciplinary in nature, stimulated to some degree by the use of modern genetic techniques. These methodologies have allowed us to make detailed analyses of plant and bacterial genes involved in symbiotic processes and to follow the growth and persistence of the root-nodule bacteria and free-living nitrogen-fixing bacteria in soils. Through the efforts of a large number of researchers we now have a better understanding of the ecology of rhizobia, environmental parameters affecting the infection and nodulation process, the nature of specificity, the biochemistry of host plants and microsymbionts, and chemical signalling between symbiotic partners. This volume gives a summary of current research efforts and knowledge in the field of biological nitrogen fixation. Since the research field is diverse in nature, this book presents a collection of papers in the major research area of physiology and metabolism, genetics, evolution, taxonomy, ecology, and international programs.




The Flagellar World


Book Description

The Flagellar World is a unique publication. The product of years of research and data collection by the author, this book is a pictorial guide to flagella in a variety of organisms. Each EM image is accompanied by a short description of the system in each organism. These never-before-seen pictures represent a wide variety of flagella, including Legionella pneumophila, Escherichia coli, Pseudomonas aeruginosa, and many others. Researchers in microbiology, immunology, and parasitology will find this a fascinating and useful resource. - A unique publication with many never before seen EM images of flagella - A historical document of years of research on flagella - Fills a specific niche that shows flagella in several varied organisms







The Prokaryotes


Book Description

The Prokaryotes is a comprehensive, multi-authored, peer reviewed reference work on Bacteria and Achaea. This fourth edition of The Prokaryotes is organized to cover all taxonomic diversity, using the family level to delineate chapters. Different from other resources, this new Springer product includes not only taxonomy, but also prokaryotic biology and technology of taxa in a broad context. Technological aspects highlight the usefulness of prokaryotes in processes and products, including biocontrol agents and as genetics tools. The content of the expanded fourth edition is divided into two parts: Part 1 contains review chapters dealing with the most important general concepts in molecular, applied and general prokaryote biology; Part 2 describes the known properties of specific taxonomic groups. Two completely new sections have been added to Part 1: bacterial communities and human bacteriology. The bacterial communities section reflects the growing realization that studies on pure cultures of bacteria have led to an incomplete picture of the microbial world for two fundamental reasons: the vast majority of bacteria in soil, water and associated with biological tissues are currently not culturable, and that an understanding of microbial ecology requires knowledge on how different bacterial species interact with each other in their natural environment. The new section on human microbiology deals with bacteria associated with healthy humans and bacterial pathogenesis. Each of the major human diseases caused by bacteria is reviewed, from identifying the pathogens by classical clinical and non-culturing techniques to the biochemical mechanisms of the disease process. The 4th edition of The Prokaryotes is the most complete resource on the biology of prokaryotes. The following volumes are published consecutively within the 4th Edition: Prokaryotic Biology and Symbiotic Associations Prokaryotic Communities and Ecophysiology Prokaryotic Physiology and Biochemistry Applied Bacteriology and Biotechnology Human Microbiology Actinobacteria Firmicutes Alphaproteobacteria and Betaproteobacteria Gammaproteobacteria Deltaproteobacteria and Epsilonproteobacteria Other Major Lineages of Bacteria and the Archaea




The Rhizobiaceae


Book Description

The Rhizobiaceae, Molecular Biology of Model Plant-Associated Bacteria. This book gives a comprehensive overview on our present molecular biological knowledge about the Rhizobiaceae, which currently can be called the best-studied family of soil bacteria. For many centuries they have attracted the attention of scientists because of their capacity to associate with plants and as a consequence also to specifically modify plant development. Some of these associations are beneficial for the plant, as is the case for the Rhizobiaceae subgroups collectively called rhizobia, which are able to fix nitrogen in a symbiosis with the plant hosts. This symbiosis results in the fonnation of root or stem nodules, as illustrated on the front cover. In contrast, several Rhizobiaceae subgroups can negatively affect plant development and evoke plant diseases. Examples are Agrobacterium tumefaciens andA. rhizogenes which induce the formation of crown galls or hairy roots on the stems of their host plants, respectively (bottom panels on front cover). In addition to the obvious importance of studies on the Rhizobiaceae for agronomy, this research field has resulted in the discovery of many fundamental scientific principles of general interest, which are highlighted in this book. To mention three examples: (i) the discovery of DNA transfer of A.




Nitrogen Fixation at the Millennium


Book Description

The turn of the millennium from the twentieth to the twenty-first century provides an occasion to review our understanding of a biological process, biological nitrogen fixation, that is of prime importance for the continued survival of mankind. This process has provided a basis for maintaining soil fertility since the beginning of organised agriculture, yet its very existence was confirmed only just over a century ago. In the intervening years, an enormous intellectual effort has dispersed much of the mystery surrounding biological nitrogen fixation. Biological fixation is widely exploited in agriculture, as are nitrogen fertilisers prepared for the last hundred years under extreme conditions of temperature and pressure. However, despite all our efforts, the fundamental nature of the reactions involved at the heart of the biological process remain unknown. This book aims to describe what we have learned in the last one hundred years or so about biological nitrogen fixation, about what its chemistry appears to be, and how it is applied in agriculture. This ambitious objective has not been attempted recently. It is aimed at students and those who wish to enter these very challenging areas of research, and who need to learn the state of the art at the turn of the millennium.The authors are all acknowledged world experts in their fields. They have prepared concise, well referenced and authoritative accounts of their subjects. This book provides a unique summary of the current state of knowledge that will be indispensable to all students and researchers, actual and potential, interested in biological nitrogen fixation.




Recent Advancement in Microbial Biotechnology


Book Description

The rapid increase in microbial resources along with the development of biotechnological methods has revolutionized the field of microbial biotechnology. Genome characterization methods and metagenomic approaches further illustrate the role of microorganisms in various fields of research. Recent Advancement in Microbial Biotechnology: Agricultural and Industrial Approach provides an overview on the recent application of the microorganisms in agricultural and industrial improvements. The purpose of this book is to integrate all these diverse areas of research in a common platform. Recent advancement in Microbial Biotechnology targets researchers from both academia and industry, professors and graduate students working in molecular biology, microbiology and biotechnology. - Gives insight in the exploration of microbial functional diversity in different systems - Highlights important microbes and their role in enhancing agricultural productivity - Provides understanding to the basics with advance information of microbial biotechnology - Explores the importance of microbial genomes studies in agricultural and industrial applications




Associative and Endophytic Nitrogen-fixing Bacteria and Cyanobacterial Associations


Book Description

This self-contained volume covers fundamental and applied aspects of nitrogen-fixation research. The book describes milestones in the discovery of the associative and endophytic nitrogen-fixing bacteria found involved with cereal crops, forage grasses, and sugar cane. It provides a comprehensive overview of their phylogeny, physiology, and genetics as well as of the biology of their association with their host plants, including tools for in situ localization and population-dynamics analysis. Also included are chapters describing the functions required for a bacterium to be competent and competitive in the rhizosphere, and analysis of associations of cyanobacteria with fungi, diatoms, bryophytes, cycads, Azolla, and Gunnera.