Trending Topics in Escherichia coli Research


Book Description

The Latin American region has been at the forefront in combating infections caused by Escherichia coli strains in humans, animals, and the environment. The continuous emergence and evolution of pathogenic E. coli strains associated with human and animal infections have demonstrated that (i) groups of related pathogenic E. coli are responsible for most infections caused by this bacterial species; (ii) diverse virulence phenotypes expressed during infection defined each one of these pathogroups; (iii) the geographical distribution of pathogroups in Latin America and the evolution of new isolates was defined by the dominant pathogroup and presence of distinct virulence strains; (iv) acquisition of mobile elements or accumulation of point mutations accelerate the development of antibiotic resistance in some of these strains. The Latin American Coalition for Escherichia coli Research (LACER), a multidisciplinary network of over seventy research groups in eleven Latin American countries and the USA, was established in 2009 to apply One Health principles in defining and combating this pathogen. The previous edition of this text, Escherichia coli in the Americas (c. 2016) was the culmination of their wisdom about E. coli, from its role as a commensal bacterium to its characteristics as a pathogen causing disease in animals and humans. This new edition presents recent advances and contextualizes all aspects of E. coli in a One Health perspective, from the environment, to animals, to humans. It addresses E. coli interactions with host microbiota, CNS, and phages. It includes cutting edge insights on hybrid strains, molecular mechanisms of virulence and pathogenesis, resistance, domestic and wild reservoirs, disease surveillance in Latin America, genomic analysis, food safety, and new therapies. Crucially, it also provides translations and analysis of key reports on Escherichia coli published in Spanish and Portuguese. This book serves as a critical resource for scientists in industry and academia, clinicians managing associated infections, and trainees and students studying basic and clinical aspects of E. coli pathogenesis.




Escherichia coli, a Versatile Pathogen


Book Description

Escherichia coli is a facultative anaerobic Gamma-proteobacterium, which belongs to the family Enterobacteriaceae. While being an important constituent of the normal gut microbiota, specialized E. coli clones have acquired genetic elements that allow them to compete with the endogenous commensals, colonise normally sterile niches and cause disease. E. coli pathotypes can cause intestinal and extra intestinal infections (e.g. UTI, sepsis) and associate with mammalian cells while being extra- or intra-cellular. In recent years, E. coli infections have become a serious clinical problem, due to the rapid spread of antibiotic resistance. Thus, infections with intestinal E. coli (e.g. E. coli O104) or extraintestinal pathogenic strains (e.g. E. coli ST131) are becoming difficult to treat and are often lethal. Consequently, there is a pressing need to develop alternative control measures, including the identification of new drug targets and development of vaccines that offer lasting protection. This volume focuses on several types of E. coli infections (intestinal and extraintestinal), virulence factors, and E. coli pandemics. It addresses the problem of antibiotic resistance, and a dedicated chapter discusses the need to develop alternative control measures. Given its depth and breadth of coverage, the book will benefit all those interested in the biology, genetics, physiology and pathogenesis of E. coli, and in related vaccine development.




Microbial Pathogenomics


Book Description

'Microbial Pathogenomics' contains a unique collection of reviews demonstrating how genomics has revolutionized our understanding of virulence, host-adaptation strategies and the evolution of bacterial pathogens. Current technologies - computational tools and functional approaches to genome analysis - are carefully documented and clearly illustrated. These include visualization tools for genome comparison, databases, in silico metabolic reconstructions and function prediction as well as interactomics for the study of protein-protein interactions. The concepts of pan-genomics and reverse vaccinology are introduced as strategies when addressing the challenge presented by bacterial diversity in the prevention and treatment of infectious diseases. The authors explore individual bacterial pathogens and discuss the mechanisms that have contributed to their evolutionary success. Special cases of host adaptation, for example, are illustrated by Helicobacter pylori and 'Mycobacterium tuberculosis' which are human-specific and highly persistent; further bacteria discussed include 'Escherichia coli, Campylobacter, Pseudomonas, Legionella, Bartonella, Burkholderia' and 'Staphylococcus'.'Microbial Pathogenomics' provides the reader with a global view of key aspects and future trends in bacterial pathogenomics and evaluates their impact on the understanding and treatment of infectious diseases. Well illustrated and accessible to both specialists and nonspecialists, it is recommended not only for researchers in microbiology, genomics and biotechnology, but also for lecturers and teachers.




Pathogenic Escherichia Coli


Book Description

In recent years, a great deal of knowledge has accumulated on the features associated with the virulence of pathogenic E. coli. A large number of virulence genes have been identified and their products characterized. Great strides have been made in the understanding of the pathogenic mechanisms and the bacterium-host interaction. However, much remains elusive in the understanding of pathogenicity at a cellular and sub-cellular level. This is largely due to E. coli genome's plasticity: it generates great variability and facilitates the rapid emergence of new pathogenic variants. Elucidating the mechanisms underlying the evolution of these pathogens and their interactions with the host are key stages for disease prevention. This book reviews the most important recent findings of the studies on pathogenic E. coli, providing a timely overview of the field. The topics covered include: epidemiology of the disease in humans and animals and the biological mechanisms that shaped the pathogenic types of E. coli * shiga toxins * subtilase cytotoxin * cell cycle modulating toxins * the heat stable and heat labile enterotoxins * haemolysins * structural, molecular, and functional characteristics of A/E lesions * colonization factor antigens of ETEC * enteroaggregative adhesion * host cell invasion * the development of vaccinal strategies to confront the burden of disease. The chapters are written from a molecular and cellular biology standpoint, but also include discussions of the findings with a wider perspective, including considerations of public health and the impact on animal productions. The book will be essential reading for everyone working on these and related pathogens.




Pathogenomics


Book Description

The first book on this young, highly dynamic, and expanding field. This comprehensive, interdisciplinary text focuses on those pathogenic bacteria that are of high scientific and public health interest, yet which also display great potential for the development of new diagnostic, prophylactic and therapeutic procedures. The authors cover all aspects of pathogenomics, including methods, genomics and applications. In addition, the ongoing development of genome, transcriptome, proteome and bioinformatic analyses of pathogenic microorganisms and their host interactions makes for a comprehensive introduction to the field of modern genomic analysis. This result is invaluable to researchers and students wishing to gain a general overview of microbial functional genome analysis and pathogenesis, while also representing a good starting point for those new to the area.




Interplay of Virulence, Antibiotic Resistance and Epidemiology in Escherichia Coli Clinical Isolates


Book Description

Escherichia coli are one of the microorganisms most frequently studied worldwide. They are Gram-negative bacilli, facultative anaerobic, rod-shaped bacterium, which are most often found in the gastrointestinal tract as a normal coloniser of warm blood organisms (mainly in mammals, but are also present in birds, reptiles and fish). Taxonomically, E. coli belong to the Enterobacteriaceae family and are an important component of the intestinal microbiota, being involved in some essential metabolic processes such as the production of vitamin K and vitamin B12. E. coli also help to maintain the anaerobic environment needed for most of the microbiota by consuming oxygen that enters the gut and competitively exclude pathogens from the lower intestine of their hosts. E. coli can also adapt to life in an external environment outside hosts, such as soil, water, plants and food, due to their hardiness and metabolic flexibility. Despite establishing symbiotic relationships, this well-known microorganism can also have an important pathogenic role within their hosts, especially from a human point of view. It is able to cause a wide variety of infections that can reach a high prevalence and even cause significant morbidity and mortality. According to a recent report on this topic, it is predicted that three million people will die from a drug-resistant E. coli infection by 2050 if no measures are taken to tackle the problem of antimicrobial resistance. Although this figure exceeds that expected in a developed continent, it demonstrates the presence of an emerging health threat - antimicrobial resistance. Bacterial pathogenicity is defined as the genetic capacity of the bacterium to cause disease, based on the virulence and resistance traits it possesses. Unfortunately, E. coli can easily acquire this capacity and is considered a major cause of human infectious disease worldwide. In order to better understand the double component of the pathogenicity of E. coli, it is important to accurately define two concepts: virulence and resistance. Virulence is the pathogenic ability to cause damage in a host and is mediated by the expression of combined virulence factors. Resistance is the capacity to persist and grow in a determinate environment taking into account different variables such as temperature, pH conditions or antimicrobial concentrations. The antimicrobial resistance of E. coli is a worrisome aspect, which is very important and difficult to manage. This PhD dissertation is focused on the study of the molecular bases of the most prevalent antimicrobial resistance mechanisms in E. coli as well as the prevalence of different VFGs in various intestinal and extraintestinal E. coli infections in order to better understand the pathogenic aspects of this bacterium in human hosts.




Microbiology of Urinary Tract Infections


Book Description

Generally, in accordance with anatomical characteristics, urinary tract infections (UTIs) and in particular recurrent UTIs occur in women; in contrast, UTIs normally occur in men with different predisposing factors. There are several types of UTIs, including asymptomatic and symptomatic, complicated and uncomplicated, acute and chronic with a diversity of microbial pathogens. In pathogens, virulence factors and genes determine the type and severity of the UTIs. Obviously, UTIs are a huge problem in global public healthcare systems with a wide range of predisposing factors, including gender, microbial agent, the host's immune deficiencies, genetic diseases, catheterization, etc. The recent items determine the microbiology of UTIs. Accurate diagnosis and definitive treatment are the key to UTI reduction.




Principles of Bacterial Pathogenesis


Book Description

Principles of Bacterial Pathogenesis presents a molecular perspective on a select group of bacterial pathogens by having the leaders of the field present their perspective in a clear and authoritative manner. Each chapter contains a comprehensive review devoted to a single pathogen. Several chapters include work from authors outside the pathogenesis field, providing general perspectives on the evolution, regulation, and secretion of virulence and determinants. Explains the basic principles of bacterial pathogenesis Covers diverse aspects integrating regulation, cellular microbiology and evolution of microbial disease of humans Discusses current strategies for the identification of virulence determinants and the methods used by microbes to deliver virulence factors Presents authoritative treatises of the major disease microorganisms




Microbiology of Waterborne Diseases


Book Description

The second edition of Microbiology of Waterborne Diseases describes the diseases associated with water, their causative agents and the ways in which they gain access to water systems. The book is divided into sections covering bacteria, protozoa, and viruses. Other sections detail methods for detecting and identifying waterborne microorganisms, and the ways in which they are removed from water, including chlorine, ozone, and ultraviolet disinfection. The second edition of this handbook has been updated with information on biofilms and antimicrobial resistance. The impact of global warming and climate change phenomena on waterborne illnesses are also discussed. This book serves as an indispensable reference for public health microbiologists, water utility scientists, research water pollution microbiologists environmental health officers, consultants in communicable disease control and microbial water pollution students. Focuses on the microorganisms of most significance to public health, including E. coli, cryptosporidium, and enterovirus Highlights the basic microbiology, clinical features, survival in the environment, and gives a risk assessment for each pathogen Contains new material on antimicrobial resistance and biofilms Covers drinking water and both marine and freshwater recreational bathing waters