Computational Topology


Book Description

Combining concepts from topology and algorithms, this book delivers what its title promises: an introduction to the field of computational topology. Starting with motivating problems in both mathematics and computer science and building up from classic topics in geometric and algebraic topology, the third part of the text advances to persistent homology. This point of view is critically important in turning a mostly theoretical field of mathematics into one that is relevant to a multitude of disciplines in the sciences and engineering. The main approach is the discovery of topology through algorithms. The book is ideal for teaching a graduate or advanced undergraduate course in computational topology, as it develops all the background of both the mathematical and algorithmic aspects of the subject from first principles. Thus the text could serve equally well in a course taught in a mathematics department or computer science department.




Advances in Applied and Computational Topology


Book Description

What is the shape of data? How do we describe flows? Can we count by integrating? How do we plan with uncertainty? What is the most compact representation? These questions, while unrelated, become similar when recast into a computational setting. Our input is a set of finite, discrete, noisy samples that describes an abstract space. Our goal is to compute qualitative features of the unknown space. It turns out that topology is sufficiently tolerant to provide us with robust tools. This volume is based on lectures delivered at the 2011 AMS Short Course on Computational Topology, held January 4-5, 2011 in New Orleans, Louisiana. The aim of the volume is to provide a broad introduction to recent techniques from applied and computational topology. Afra Zomorodian focuses on topological data analysis via efficient construction of combinatorial structures and recent theories of persistence. Marian Mrozek analyzes asymptotic behavior of dynamical systems via efficient computation of cubical homology. Justin Curry, Robert Ghrist, and Michael Robinson present Euler Calculus, an integral calculus based on the Euler characteristic, and apply it to sensor and network data aggregation. Michael Erdmann explores the relationship of topology, planning, and probability with the strategy complex. Jeff Erickson surveys algorithms and hardness results for topological optimization problems.




Topological Data Analysis


Book Description

This book gathers the proceedings of the 2018 Abel Symposium, which was held in Geiranger, Norway, on June 4-8, 2018. The symposium offered an overview of the emerging field of "Topological Data Analysis". This volume presents papers on various research directions, notably including applications in neuroscience, materials science, cancer biology, and immune response. Providing an essential snapshot of the status quo, it represents a valuable asset for practitioners and those considering entering the field.




Distributed Computing Through Combinatorial Topology


Book Description

Distributed Computing Through Combinatorial Topology describes techniques for analyzing distributed algorithms based on award winning combinatorial topology research. The authors present a solid theoretical foundation relevant to many real systems reliant on parallelism with unpredictable delays, such as multicore microprocessors, wireless networks, distributed systems, and Internet protocols. Today, a new student or researcher must assemble a collection of scattered conference publications, which are typically terse and commonly use different notations and terminologies. This book provides a self-contained explanation of the mathematics to readers with computer science backgrounds, as well as explaining computer science concepts to readers with backgrounds in applied mathematics. The first section presents mathematical notions and models, including message passing and shared-memory systems, failures, and timing models. The next section presents core concepts in two chapters each: first, proving a simple result that lends itself to examples and pictures that will build up readers' intuition; then generalizing the concept to prove a more sophisticated result. The overall result weaves together and develops the basic concepts of the field, presenting them in a gradual and intuitively appealing way. The book's final section discusses advanced topics typically found in a graduate-level course for those who wish to explore further. - Named a 2013 Notable Computer Book for Computing Methodologies by Computing Reviews - Gathers knowledge otherwise spread across research and conference papers using consistent notations and a standard approach to facilitate understanding - Presents unique insights applicable to multiple computing fields, including multicore microprocessors, wireless networks, distributed systems, and Internet protocols - Synthesizes and distills material into a simple, unified presentation with examples, illustrations, and exercises




A Short Course in Computational Geometry and Topology


Book Description

This monograph presents a short course in computational geometry and topology. In the first part the book covers Voronoi diagrams and Delaunay triangulations, then it presents the theory of alpha complexes which play a crucial role in biology. The central part of the book is the homology theory and their computation, including the theory of persistence which is indispensable for applications, e.g. shape reconstruction. The target audience comprises researchers and practitioners in mathematics, biology, neuroscience and computer science, but the book may also be beneficial to graduate students of these fields.




Topological Data Analysis with Applications


Book Description

This timely text introduces topological data analysis from scratch, with detailed case studies.




Topology for Computing


Book Description

The emerging field of computational topology utilizes theory from topology and the power of computing to solve problems in diverse fields. Recent applications include computer graphics, computer-aided design (CAD), and structural biology, all of which involve understanding the intrinsic shape of some real or abstract space. A primary goal of this book is to present basic concepts from topology and Morse theory to enable a non-specialist to grasp and participate in current research in computational topology. The author gives a self-contained presentation of the mathematical concepts from a computer scientist's point of view, combining point set topology, algebraic topology, group theory, differential manifolds, and Morse theory. He also presents some recent advances in the area, including topological persistence and hierarchical Morse complexes. Throughout, the focus is on computational challenges and on presenting algorithms and data structures when appropriate.




SPIG2018


Book Description

This Special Issue covers a wide range of topics from fundamental studies to applications of ionized gases. It is dedicated to four topics of interest: 1. ATOMIC COLLISION PROCESSES (electron and photon interactions with atomic particles, heavy particle collisions, swarms, and transport phenomena); 2. PARTICLE AND LASER BEAM INTERACTION WITH SOLIDS (atomic collisions in solids, sputtering and deposition, and laser and plasma interactions with surfaces); 3. LOW TEMPERATURE PLASMAS (plasma spectroscopy and other diagnostic methods, gas discharges, and plasma applications and devices); 4. GENERAL PLASMAS (fusion plasmas, astrophysical plasmas, and collective phenomena). This Special Issue of Atoms will highlight the need for continued research on ionized gas physics in different topics ranging from fundamental studies to applications, and will review current investigations.




Computational Topology for Biomedical Image and Data Analysis


Book Description

This book provides an accessible yet rigorous introduction to topology and homology focused on the simplicial space. It presents a compact pipeline from the foundations of topology to biomedical applications. It will be of interest to medical physicists, computer scientists, and engineers, as well as undergraduate and graduate students interested in this topic. Features: Presents a practical guide to algebraic topology as well as persistence homology Contains application examples in the field of biomedicine, including the analysis of histological images and point cloud data




Geometric and Topological Inference


Book Description

A rigorous introduction to geometric and topological inference, for anyone interested in a geometric approach to data science.