Microbial Ecology of Arid Terrestrial Systems


Book Description

Water is usually referred to as the ‘Molecule of Life’. It constitutes the most abundant molecule in living (micro)organisms and is also essential for critical biochemical reactions, both for the global functioning and maintenance of Ecosystems (e.g., Photosynthesis) and individual (microbial) cells (e.g., ATP hydrolysis). However, most of Earth’s terrestrial environments present deficiencies in bioavailable water. Arid environments cover around a third of the land’s surface, are found on the six continents and, with the anthropogenic desertification phenomenon, will increase. Commonly defined by having a ratio of precipitation to potential evapotranspiration (P/PET) below 1, arid environments, being either hot or cold, are characterized by scant and erratic plant growth and low densities in macro-fauna. Consequently, these ecosystems are microbially mediated with microbial communities particularly driving the essential Na and C biogeochemical cycles. Due to the relatively simple trophic structure of these biomes, arid terrestrial environments have subsequently been used as ideal ecosystems to capture and model interactions in edaphic microbial communities. To date, we have been able to demonstrate that edaphic microorganisms (i.e., Fungi, Bacteria, Archaea, and Viruses) in arid environments are abundant, highly diverse, different from those of other terrestrial systems (both in terms of diversity and function), and are important for the stability and productivity of these ecosystems. Moreover, arid terrestrial systems are generally considered Mars-like environments. Thus, they have been the favored destination for astro(micro)biologists aiming to better understand life’s potential distribution and adaptation strategies in the Universe and develop terraforming approaches. Altogether, these points demonstrate the importance of significantly improving our knowledge in the microbial community composition (particularly for Fungi, Archaea and Viruses), assembly processes and functional potentials of arid terrestrial systems, as well as their adaptation mechanisms to aridity (and generally to various other environmental stresses). This Research Topic was proposed to provide further insights on the microbial ecology of hot and cold arid edaphic systems. We provide a detailed review and nine research articles, spanning hot and cold deserts, edaphic, rhizospheric, BSC and endolithic environments as well as culture-dependent and -independant approaches.




Microbiology of Hot Deserts


Book Description

This book covers the wider aspects of the microbiology of hot desert soil ecosystems, compiling disparate information from a range of relevant desert soil microbial fields. The reader learns about microbial ecology of the more dominant and possibly most important desert habitats, detailing the phylogenetic and functional diversity of these different habitats as well as their potential role in desert ecosystem ecology. Particular attention is also given to microbial stress adaptation in hot desert soils. Furthermore, it is the first volume in this particular field to cover modern metagenomics technologies that can be applied to studies of all aspects of desert microbial communities. Additionally, the book explores viruses and viral communities, which are among the least studied (and little understood) components of desert soil microbial communities. Particular attention is also given to the roles of desert microbial communities in biogeochemical cycling of carbon, nitrogen and phosphorus. Through this book the reader discovers how desert microbiology has been at the forefront of Astrobiology and how it may be used conceptually in future terraforming strategies. Desert ecosystems are increasingly coming into focus given the impacts of climate change and desertification trends, making this volume particularly timely. Each of the chapters is authored by leading international researchers and is a must-read for microbial ecologists. .




Advances in Microbial Ecology


Book Description

Since the appearance of the first volume of Advances in Microbial Ecology in 1977 under the editorship of Martin Alexander, the series has achieved wide recognition as a source of in-depth, critical, and sometimes provocative reviews on the ecology of microorganisms in natural and man-made ecosystems. Most reviews published in Advances have been prepared by experts at the invitation of the Editorial Board. The Board intends to continue its policy of soliciting reviews, but individuals are encouraged to submit outlines of unsolicited con tributions for consideration of their suitability for publication in Advances. Volume 7 of Advances in Microbial Ecology covers a range of topics related to the ecology of microorganisms in natural and artificial habitats. R. M. Atlas discusses the measurement and significance of diversity in microbial communities. The nature of deserts and the activity of microorganisms in desert soils are considered by J. Skujil)s. D. B. Nedwell examines both the input and the mineralization of organic carbon in anaerobic aquatic sediments. The role of microcosms in the evaluation of interactions between pollutants and microorganisms is the basis of a major review by P. H. Pritchard and A. W. Bourquin.




Ecology of Desert Systems


Book Description

Nearly one-third of the land area on our planet is classified as arid or desert. Therefore, an understanding of the dynamics of such arid ecosystems is essential to managing those systems in a way that sustains human populations. This second edition of Ecology of Desert Systems provides a clear, extensive guide to the complex interactions involved in these areas. This book details the relationships between abiotic and biotic environments of desert ecosystems, demonstrating to readers how these interactions drive ecological processes. These include plant growth and animal reproductive success, the spatial and temporal distribution of vegetation and animals, and the influence of invasive species and anthropogenic climate change specific to arid systems. Drawing on the extensive experience of its expert authors, Ecology of Desert Systems is an essential guide to arid ecosystems for students looking for an overview of the field, researchers keen to learn how their work fits in to the overall picture, and those involved with environmental management of desert areas. - Highlights the complexity of global desert systems in a clear, concise way - Reviews the most current issues facing researchers in the field, including the spread of invasive species due to globalized trade, the impact of industrial mining, and climate change - Updated and extended to include information on invasive species management, industrial mining impacts, and the current and future role of climate change in desert systems




The Biology of Arid Soils


Book Description

Soils have been called the most complex microbial ecosystems on Earth. A single gram of soil can harbor millions of microbial cells and thousands of species. However, certain soil environments, such as those experiencing dramatic change exposing new initial soils or that are limited in precipitation, limit the number of species able to survive in these systems. In this respect, these environments offer unparalleled opportunities to uncover the factors that control the development and maintenance of complex microbial ecosystems. This book collects chapters that discuss the abiotic factors that structure arid and initial soil communities as well as the diversity and structure of the biological communities in these soils from viruses to plants.




Environmental Microbiology and Microbial Ecology


Book Description

An authoritative overview of the ecological activities of microbes in the biosphere Environmental Microbiology and Microbial Ecology presents a broad overview of microbial activity and microbes' interactions with their environments and communities. Adopting an integrative approach, this text covers both conventional ecological issues as well as cross-disciplinary investigations that combine facets of microbiology, ecology, environmental science and engineering, molecular biology, and biochemistry. Focusing primarily on single-cell forms of prokaryotes — and cellular forms of algae, fungi, and protozoans — this book enables readers to gain insight into the fundamental methodologies for the characterization of microorganisms in the biosphere. The authors draw from decades of experience to examine the environmental processes mediated by microorganisms and explore the interactions between microorganisms and higher life forms. Highly relevant to modern readers, this book examines topics including the ecology of microorganisms in engineered environments, microbial phylogeny and interactions, microbial processes in relation to environmental pollution, and many more. Now in its second edition, this book features updated references and major revisions to chapters on assessing microbial communities, community relationships, and their global impact. New content such as effective public communication of research findings and advice on scientific article review equips readers with practical real-world skills. Explores the activities of microorganisms in specific environments with case studies and actual research data Highlights how prominent microbial biologists address significant microbial ecology issues Offers guidance on scientific communication, including scientific presentations and grant preparation Includes plentiful illustrations and examples of microbial interactions, community structures, and human-bacterial connections Provides chapter summaries, review questions, selected reading lists, a complete glossary, and critical thinking exercises Environmental Microbiology and Microbial Ecology is an ideal textbook for graduate and advanced undergraduate courses in biology, microbiology, ecology, and environmental science, while also serving as a current and informative reference for microbiologists, cell and molecular biologists, ecologists, and environmental professionals.




Microbiology of Extreme Soils


Book Description

This volume provides a comprehensive coverage of the principal extreme soil ecosystems of natural and anthropogenic origin. Extreme soils oppose chemical or physical limits to colonization by most soil organisms and present the microbiologist with exciting opportunities. Described here are a range of fascinating environments from permafrost to Martian soils. The book includes chapters on basic research in addition to applications in biotechnology and bioremediation.




Environmental and Agricultural Microbiology


Book Description

Environmental and Agricultural Microbiology Uniquely reveals the state-of-the-art microbial research/advances in the environment and agriculture fields Environmental and Agricultural Microbiology: Applications for Sustainability is divided into two parts which embody chapters on sustenance and life cycles of microorganisms in various environmental conditions, their dispersal, interactions with other inhabited communities, metabolite production, and reclamation. Though books pertaining to soil & agricultural microbiology/environmental biotechnology are available, there is a dearth of comprehensive literature on the behavior of microorganisms in the environmental and agricultural realm. Part 1 includes bioremediation of agrochemicals by microalgae, detoxification of chromium and other heavy metals by microbial biofilm, microbial biopolymer technology including polyhydroxyalkanoates (PHAs) and polyhydroxybutyrates (PHB), their production, degradability behaviors, and applications. Biosurfactants production and their commercial importance are also systematically represented in this part. Part 2 having 9 chapters, facilitates imperative ideas on approaches for sustainable agriculture through functional soil microbes, next-generation crop improvement strategies via rhizosphere microbiome, production and implementation of liquid biofertilizers, mitigation of methane from livestock, chitinases from microbes, extremozymes, an enzyme from extremophilic microorganism and their relevance in current biotechnology, lithobiontic communities, and their environmental importance, have all been comprehensively elaborated. In the era of sustainable energy production, biofuel and other bioenergy products play a key role, and their production from microbial sources are frontiers for researchers. The final chapter unveils the importance of microbes and their consortia for management of solid waste in amalgamation with biotechnology Audience The book will be read by environmental microbiologists, biotechnologists, chemical and agricultural engineers.




Metagenomics and Microbial Ecology


Book Description

Microorganisms comprise the greatest genetic diversity in the natural ecosystem, and characterization of these microbes is an essential step towards discovering novel products or understanding complex biological mechanisms. The advancement of metagenomics coupled with the introduction of high-throughput, cost-effective NGS technology has expanded the possibilities of microbial research in various biological systems. In addition to traditional culture and biochemical characteristics, omics approaches (metagenomics, metaproteomics, and metatranscriptomics) are useful for analyzing complete microbial communities and their functional attributes in various environments. Metagenomics and Microbial Ecology: Techniques and Applications explores the most recent advances in metagenomics research in the landscape of next-generation sequencing technologies. This book also describes how advances in sequencing technologies are used to study invisible microbes as well as the relationships between microorganisms in their respective environments. Features: Covers a wide range of concepts, investigations, and technological advancement in metagenomics at the global level. Highlights the novel and recent approaches to analyze microbial diversity and its functional attributes. Features a range of chapters that present an introduction to the field and functional insight into various ecosystems.




Microbiomes of the Built Environment


Book Description

People's desire to understand the environments in which they live is a natural one. People spend most of their time in spaces and structures designed, built, and managed by humans, and it is estimated that people in developed countries now spend 90 percent of their lives indoors. As people move from homes to workplaces, traveling in cars and on transit systems, microorganisms are continually with and around them. The human-associated microbes that are shed, along with the human behaviors that affect their transport and removal, make significant contributions to the diversity of the indoor microbiome. The characteristics of "healthy" indoor environments cannot yet be defined, nor do microbial, clinical, and building researchers yet understand how to modify features of indoor environmentsâ€"such as building ventilation systems and the chemistry of building materialsâ€"in ways that would have predictable impacts on microbial communities to promote health and prevent disease. The factors that affect the environments within buildings, the ways in which building characteristics influence the composition and function of indoor microbial communities, and the ways in which these microbial communities relate to human health and well-being are extraordinarily complex and can be explored only as a dynamic, interconnected ecosystem by engaging the fields of microbial biology and ecology, chemistry, building science, and human physiology. This report reviews what is known about the intersection of these disciplines, and how new tools may facilitate advances in understanding the ecosystem of built environments, indoor microbiomes, and effects on human health and well-being. It offers a research agenda to generate the information needed so that stakeholders with an interest in understanding the impacts of built environments will be able to make more informed decisions.