Organohalide-Respiring Bacteria


Book Description

This book summarizes the current state of knowledge concerning bacteria that use halogenated organic compounds as respiratory electron acceptors. The discovery of organohalide-respiring bacteria has expanded the range of electron acceptors used for energy conservation, and serves as a prime example of how scientific discoveries are enabling innovative engineering solutions that have transformed remediation practice. Individual chapters provide in-depth background information on the discovery, isolation, phylogeny, biochemistry, genomic features, and ecology of individual organohalide-respiring genera, including Dehalococcoides, Dehalogenimonas, Dehalobacter, Desulfitobacterium and Sulfurospirillum, as well as organohalide-respiring members of the Deltaproteobacteria. The book introduces readers to the fascinating biology of organohalide-respiring bacteria, offering a valuable resource for students, engineers and practitioners alike.




Dehalogenation


Book Description

Halogenated organic compounds constitute one of the largest groups of environmental chemicals. The industrial production of new halogenated organic compounds has increased throughout the last century peaking in the 1960s, and continuing in widespread use today. Organohalides are integral to a variety of industrial applications, including use as solvents, degreasing agents, biocides, pharmaceuticals, plasticizers, hydraulic and heat transfer fluids, and intermediates for chemical synthesis, to name a few. It is important to recognize the beneficial aspects of halogenated organic compounds, as well as their potentially deleterious impact on the environment and health. Recognition ofthe adverse environmental effects ofmanytypes oforganohalide compounds has led to efforts to reduce or eliminate the most problematic ones. Although organohalide compounds are typically considered to be anthropogenic industrial compounds, they have their counterpart in several thousands of natural biogenic and geogenic organohalides, representing most classes of organic chemicals. Natural sources account for a significant portion of the global organohalogen budget. This volume authored by recognized experts in the field provides a current perspective on how both natural and synthetic organohalides are formed and degraded, and how these processes are incorporated into a global halogen cycle. The focus is on microbial processes, since these play a major role both in the production and degradation, i. e. , cycling of halogenated organic compounds inthe environment. This book is organized into five parts. Part I, Introduction, provides a global perspective on the issues of organohalides and their fate in the environment.




Prokaryotic Metabolism and Physiology


Book Description

Extensive and up-to-date review of key metabolic processes in bacteria and archaea and how metabolism is regulated under various conditions.




Organohalide Respiration: New Findings in Metabolic Mechanisms and Bioremediation Applications


Book Description

Microbial reductive dehalogenation mediated by organohalide-respiring bacteria plays a critical role in the natural halogen cycle, representing a promising solution for removal of organohalide pollutants. This Research Topic presents many of the more recent advances that have been made in this area. Authors from leading research groups contributed to this eBook, and provided mechanistic insights into organohalide respiration, as well as their bioremediation implications, at molecular, cellular, community and system levels.




Biodegradative Bacteria


Book Description

Biodegradative Bacteria highlights the novel nature of bacterial cell functions in the field of biodegradation by putting them into three parts: (1) Genetic and genomic systems, (2) Degradative enzyme systems, and (3) Bacterial behavior in natural environmental systems. The first part of the book includes cell functions as degradative machinery, genome systems for effective degradation, and the evolution of degradative systems by mobile genetic elements. The second part deals with the structure, function, evolution, diversity, and application of degradative and related enzymes. The third part presents cell or genomic behaviors of biodegradative bacteria in natural ecosystems. Bacterial metabolic capacity, which plays an important role in the global material cycle, contributes significantly to the buffering capacity for the huge and unintended release of various chemicals. Recently, however, the prosperity and globalization of material civilization has led not only to severe local contamination by hazardous chemicals, but also to continuous increment of contaminant concentrations worldwide. To solve such urgent global issues, bacterial functions that are involved in biodegradation of hazardous chemicals have been analyzed. The term “biodegradative bacteria” refers to those bacteria that have the ability to degrade such xenobiotic (man-made) and/or hazardous chemicals. Analyses of biodegradative bacteria include diverse areas of study, such as genetics, enzymology, genomics, cell physiology, ecology, and evolutionary biology. In other words, the targets investigated in research on biodegradative bacteria include single molecules, single cell systems, bacterial consortia (interaction with surrounding microorganisms), and interaction with surrounding biotic and abiotic materials. Such complexity makes the research on biodegradative bacteria difficult but quite interesting.







Flavin-Dependent Enzymes: Mechanisms, Structures and Applications


Book Description

The Enzymes, Volume 47, highlights new advances in the field, with this new volume presenting interesting chapters on The Multipurpose Family of Oxidases, Vanillyl alcohol oxidase, Choline oxidases, Aryl alcohol oxidase, D- and L-amino acid oxidases, Sugar oxidases, Phenolic Compounds hydroxylases, Baeyer-Villiger Monooxygenases, Flavin-dependent halogenases, Flavin-dependent dehalogenases, Styrene Monooxygenases, Bacterial luciferases, Cellobiose Dehydrogenases, Prenylated flavoenzymes, Ene-reductases, Flavoenzymes in Biocatalysis. - Provides the authority and expertise of leading contributors from an international board of authors - Presents the latest release in The Enzymes series




Advances in Microbial Physiology


Book Description

Advances in Microbial Physiology, Volume 74, the latest release in this ongoing series, continues the long tradition of topical, important, cutting-edge reviews in microbiology. The book contains updates in the field, with comprehensive chapters covering The electrifying physiology of Geobacter bacteria 30 years on, Adaptive morphogenesis in bacteria, Bacterial energetics and respiratory metabolism, Bacteria respiration during infection, Regulation of Organohalide Respiration, Bioenergetics of Campylobacter jejuni, Formate Hydrogenlyases, Bioenergetical Aspects of the Bacterial and Archaeal Hydrogen Metabolism, and more. - Contains contributions from leading authorities in microbial physiology - Informs and updates on all the latest developments in the field of microbial physiology




Bioaugmentation for Groundwater Remediation


Book Description

​This volume provides a review of the past 10 to 15 years of intensive research, development and demonstrations that have been on the forefront of developing bioaugmentation into a viable remedial technology. This volume provides both a primer on the basic microbial processes involved in bioaugmentation, as well as a thorough summary of the methodology for implementing the technology. This reference volume will serve as a valuable resource for environmental remediation professionals who seek to understand, evaluate, and implement bioaugmentation.




Handbook of Bioremediation


Book Description

Handbook of Bioremediation: Physiological, Molecular and Biotechnological Interventions discusses the mechanisms of responding to inorganic and organic pollutants in the environment using different approaches of phytoremediation and bioremediation. Part One focuses specifically on inorganic pollutants and the use of techniques such as metallothionein-assisted remediation, phytoextraction and genetic manipulation. Part Two covers organic pollutants and consider topics such as plant enzymes, antioxidant defense systems and the remediation mechanisms of different plant species. This comprehensive volume is a must-read for researchers interested in plant science, agriculture, soil science and environmental science. The techniques covered in this book will ensure scientists have the knowledge to practice effective bioremediation techniques themselves. - Provides a comprehensive review of the latest advances in bioremediation of organic and inorganic pollutants - Discusses a range of different phytoremediation techniques - Evaluates the role of genomics and bioinformatics within bioremediation