Exploring Light Controls on Phytoplankton Community Structure and the Biogeochemistry of the Ross Sea, Antarctica


Book Description

The Southern Ocean is one of the most important regions on Earth for absorption of anthropogenic carbon dioxide (CO2) from the atmosphere and long-term storage of that carbon in deep water and ocean sediments. While a significant amount of CO2 enters the deep ocean in this region along oceanographic fronts through the solubility pump, large seasonal phytoplankton blooms form on the Antarctic continental shelf and suggest that the biological pump also plays an important, and possibly underestimated, role in the oceanic sequestration of atmospheric CO2. This dissertation investigates the mechanisms by which light may control phytoplankton species distributions in one of the most productive areas of the Antarctic continental shelf, the Ross Sea. The Ross Sea is commonly dominated by two major phytoplankton species, diatoms, and the haptophyte, Phaeocystis antarctica. The distributions of these species are often correlated with different mixed layer environments, with diatoms dominating shallow mixed layers and P. antarctica dominating deeper mixed layers. Using a series of laboratory experiments, differences were assessed between P. antarctica and the common Ross Sea diatom, Fragilariopsis cylindrus, in their capacity for xanthophyll cycle photoprotection (Chapter 2). This was followed by chemical inhibition experiments that quantified the relative important of xanthophyll cycle photoprotection and the repair of photodamage for maintaining photosynthetic performance in each species. F. cylindrus produced significantly higher concentrations of xanthophyll cycle pigment and epoxidation of activated pigment (diatoxanthin epoxidation to diadinoxanthin) occurred much more slowly upon transition to low light than in P. antarctica. Although both species relied on xanthophyll cycle photoprotection to avoid photoinhibition and maintain maximal photosynthetic rates, P. antarctica was much more adversely affected when repair of photodamage was inhibited. Differences between species in strategies and rates of photoacclimation were also assessed (Chapter 3). F. cylindrus acclimated to shifts in irradiance by adjusting photosynthetic efficiency, with large changes in the functional absorption cross-section of photosystem two ([sigma]PSII) inferred from physiological measurements. P. antarctica exhibited significant changes in both photosynthetic efficiency and the maximum capacity for photosynthesis following shifts in irradiance. Changes in both [sigma]PSII and the number photosynthetic reaction centers or their maximum turnover rate were inferred from physiological measurements. Light was also found to play an important role in controlling elemental ratios in F. cylindrus and P. antarctica (Chapter 4). Particulate organic carbon to nitrogen to phosphorus ratios (C:N:P) varied as a function of growth irradiance in both species, but significant differences between species grown in identical conditions were also observed. F. cylindrus exhibited C:N:P ratios that were significantly lower than those of P. antarctica and often below the Redfield ratio, in agreement with observations from the Ross Sea. In contrast, P. antarctica exhibited ratios above the Redfield ratio when grown in all but very high light conditions. While protein, nucleic acid, and chlorophyll (Chl) concentrations explained the provenance of nearly 100% of particulate N in both species, nucleic acid concentrations were not sufficient to explain particulate P in either species. The remaining P could be partially accounted for if these species produce large concentrations of phospholipids, but storage of inorganic P most likely forms the largest cellular P-pool in nutrient replete cultures. Finally, data from the laboratory experiments were used to calculate phytoplankton growth rates in an ecosystem model of the Ross Sea to test the hypothesis that photophysiological differences between diatoms and P. antarctica can explain their distributions (Chapter 5). The phytoplankton growth model was modified from a previous steady-state model that included four physiological variables, the maximum quantum yield of photosynthesis ([phi]M), the irradiance at which [phi] = 1/2 [phi]M, the carbon to Chl ratio, and mean Chl-specific absorption. The parameters were allowed to vary as a function of mean mixed layer irradiance according to equations derived from laboratory data and acclimation rates measured in light shift experiments. Chl concentrations and distributions of P. antarctica and diatoms in the model agreed well with field observations, demonstrating that light is sufficient to explain phytoplankton community composition in the Ross Sea. These results also demonstrate that physiological information collected from ecologically relevant algal cultures can be used to understand and model phytoplankton dynamics in the natural environment.










YOUMARES 8 – Oceans Across Boundaries: Learning from each other


Book Description

This open access book presents the proceedings volume of the YOUMARES 8 conference, which took place in Kiel, Germany, in September 2017, supported by the German Association for Marine Sciences (DGM). The YOUMARES conference series is entirely bottom-up organized by and for YOUng MARine RESearchers. Qualified early career scientists moderated the scientific sessions during the conference and provided literature reviews on aspects of their research field. These reviews and the presenters’ conference abstracts are compiled here. Thus, this book discusses highly topical fields of marine research and aims to act as a source of knowledge and inspiration for further reading and research.




Small-Scale Physical Processes Related to the Dynamic Photosynthetic Response of Phytoplankton Entrained in the Euphotic Zone of the Ocean


Book Description

Phytoplankton directly influence many optical and acoustic characteristics of the oceanic water column. Under nutrient sufficient conditions (Falkowski et al., 1992), phytoplankton activity is regulated both by the varying photosynthetically active photon fluence density (PPFD) exposure and by the photosynthetic potential of the individual cells throughout the water column (Marra, 1978a; 1978b). PPFD at the sea surface varies over a range of time scales due to clouds, and day/night and seasonal cycles (Kirk, 1983). Subsurface PPFD exhibits spectral changes with depth due to wavelength-dependent exponential attenuation (Kirk, 1983). Additional temporal variation in subsurface PPFD results from dissolved organic matter (DOM) and particulate organic matter (POM) patchiness (Parsons et al., 1984a). Near surface water motion, the net effect of turbulent mixing, surface and internal gravity waves, wind drift, Langmuir circulation and larger scale flow (Denman and Gargett, 1983), transports algal cells through the fluctuating PPFD field. Some cells act like neutral Lagrangian particles, but most possess an inherent motility due to buoyancy (S nayda, 1970; Walsby and Reynolds, 1980) or swimming (Roberts, 1981; Kamykowski et al. 1988). The physical and biological motion vectors combine to determine phytoplankton trajectories. Since the emphasis here is PPFD exposure of individual phytoplankton cells, vertical displacement is of primary concern (Kamykowski, 1990; Yamazaki and Kamykowski, 1990). One aspect of the work in his report dealt with the development of the Physical Motion instrument (PMI) to monitor water motion in over biologically significant time scales.




Weddell Sea Ecology


Book Description




Using High-resolution Glider Data and Biogeochemical Modeling to Investigate Phytoplankton Variability in the Ross Sea


Book Description

As Earth’s climate changes, polar environments experience a disproportionate share of extreme shifts. Because the Ross Sea shelf has the highest annual productivity of any Antarctic continental shelf, this region is of particular interest when striving to characterize current and future changes in Antarctic systems. However, understanding of mesoscale variability of biogeochemical patterns in the Ross Sea and how this variability affects assemblage dynamics is incomplete. Furthermore, it is unknown how the Ross Sea may respond to projected warming, reduced summer sea ice concentrations, and shallower mixed layers during the next century. To investigate these dynamics and explore their consequences over the next century, high-resolution glider observations were analyzed and used in conjunction with a one-dimensional, data-assimilative biogeochemical-modeling framework. An analysis of glider observations from two latitudinal sections in the Ross Sea characterized mesoscale variability associated with the phytoplankton bloom and highlighted potential mechanisms driving change in the assemblage. In particular, an observed increase in the ratio of carbon to chlorophyll (C:Chl) suggested a marked transition from a phytoplankton assemblage dominated by Phaeocystis antarctica- to one dominated by diatoms. The expected control of phytoplankton variability by Modified Circumpolar Deep Water and mixed layer depth were shown to be insignificant relative to the effects of wind and sea surface temperature on the temporal/spatial scales measured by the glider. Additional glider measurements were used to force the Model of Ecosystem Dynamics, nutrient Utilisation, Sequestration and Acidification, which was adapted for use in the Ross Sea (MEDUSA-RS) to include both solitary and colonial forms of Phaeocystis antarctica. The impacts of climate-induced changes on Ross Sea phytoplankton were investigated with MEDUSA-RS using projections of physical drivers for mid- and late-21st century, and these experiments indicated increases of primary productivity and carbon export flux. Additional scenario experiments demonstrated that earlier availability of low light due to reduction of sea ice early in the growing season was the primary driver of simulated productivity increases over the next century; shallower mixed layer depths additionally contributed to changes of phytoplankton composition and export. Glider data were assimilated into MEDUSA-RS using the Marine Model Optimization Testbed (MarMOT) to optimize eight phytoplankton model parameters. Assimilation experiments that used different data subsets suggest that assimilating observations at the surface alone, as are typically available from remote-sensing platforms, may underestimate carbon export to depth and overestimate primary production. Experiments assimilating observations characteristic of a cruise-based sampling frequency produced a wide range of solutions, depending on which days were sampled, suggesting the potential for large errors in productivity and export. Finally, assimilating data from different spatial areas resulted in less variation of optimal solutions than assimilating data from different time periods in the bloom progression; these temporal differences are primarily driven by decreasing colonial P. antarctica growth rates, increasing colonial P. antarctica C:Chl, and faster sinking of colonies as the bloom progresses from the accumulation stage through dissipation. Overall, this dissertation research demonstrates the value of using bio-optical glider observations in conjunction with modeling to characterize phytoplankton dynamics in a remote marine ecosystem. High-resolution glider data are better able to resolve mesoscale physical-biological relationships, which are typically not discernible from lower frequency data, but it can be difficult to identify mechanistic relationships from in situ measurements alone. In addition, biogeochemical models can be used to extend insights gained by empirical observation, but application is often limited by the quantity and type of in situ data appropriate for evaluation and forcing. The use of gliders for facilitating development and operation of a lower trophic level model demonstrated the effectiveness of a synthetic approach that partly overcomes the individual limitations of these otherwise distinct approaches. Finally, the combination of these approaches is especially useful for gaining a better understanding of ecosystem dynamics in regions similar to the Ross Sea that are undergoing substantive climate-induced changes and where harsh conditions make other means of access difficult.