The Microbiology of Deep-Sea Hydrothermal Vents


Book Description

The Microbiology of Deep-Sea Hydrothermal Vents is the first comprehensive treatment of the microbiology of these unusual deep-sea ecosystems. It includes information on microbial biodiversity, ecology, physiology, and the origin of life. It is the first volume available on the subject. All chapters are written by leaders in their respective fields who have made substantial contributions to the current understanding of these novel deep-sea habitats. Much of the book's material is entirely new and forward looking. Individual chapters examine the geologic setting and chemistry of deep-sea hydrothermal vents, growth at high temperatures, microbe-metal interactions and mineral deposition, stable isotopes, and more. This reference presents a unique interdisciplinary approach to the study of hydrothermal vents. Because of its thorough coverage of the subject, the book will continue to be a valuable resource for researchers in this field for the next decade.




The Ecology of Deep-sea Hydrothermal Vents


Book Description

Teeming with weird and wonderful life--giant clams and mussels, tubeworms, "eyeless" shrimp, and bacteria that survive on sulfur--deep-sea hot-water springs are found along rifts where sea-floor spreading occurs. The theory of plate tectonics predicted the existence of these hydrothermal vents, but they were discovered only in 1977. Since then the sites have attracted teams of scientists seeking to understand how life can thrive in what would seem to be intolerable or extreme conditions of temperature and fluid chemistry. Some suspect that these vents even hold the key to understanding the very origins of life. Here a leading expert provides the first authoritative and comprehensive account of this research in a book intended for students, professionals, and general readers. Cindy Lee Van Dover, an ecologist, brings nearly two decades of experience and a lively writing style to the text, which is further enhanced by two hundred illustrations, including photographs of vent communities taken in situ. The book begins by explaining what is known about hydrothermal systems in terms of their deep-sea environment and their geological and chemical makeup. The coverage of microbial ecology includes a chapter on symbiosis. Symbiotic relationships are further developed in a section on physiological ecology, which includes discussions of adaptations to sulfide, thermal tolerances, and sensory adaptations. Separate chapters are devoted to trophic relationships and reproductive ecology. A chapter on community dynamics reveals what has been learned about the ways in which vent communities become established and why they persist, while a chapter on evolution and biogeography examines patterns of species diversity and evolutionary relationships within chemosynthetic ecosystems. Cognate communities such as seeps and whale skeletons come under scrutiny for their ability to support microbial and invertebrate communities that are ecologically and evolutionarily related to hydrothermal faunas. The book concludes by exploring the possibility that life originated at hydrothermal vents, a hypothesis that has had tremendous impact on our ideas about the potential for life on other planets or planetary bodies in our solar system.




Deep Subsurface Microbiology


Book Description

Deep subsurface microbiology is a highly active and rapidly advancing research field at the interface of microbiology and the geosciences; it focuses on the detection, identification, quantification, cultivation and activity measurements of bacteria, archaea and eukaryotes that permeate the subsurface biosphere of deep marine sediments and the basaltic ocean and continental crust. The deep subsurface biosphere abounds with uncultured, only recently discovered and – at best - incompletely understood microbial populations. In spatial extent and volume, Earth's subsurface biosphere is only rivaled by the deep sea water column. So far, no deep subsurface sediment has been found that is entirely devoid of microbial life; microbial cells and DNA remain detectable at sediment depths of more than 1 km; microbial life permeates deeply buried hydrocarbon reservoirs, and is also found several kilometers down in continental crust aquifers. Severe energy limitation, either as electron acceptor or donor shortage, and scarcity of microbially degradable organic carbon sources are among the evolutionary pressures that have shaped the genomic and physiological repertoire of the deep subsurface biosphere. Its biogeochemical role as long-term organic carbon repository, inorganic electron and energy source, and subduction recycling engine continues to be explored by current research at the interface of microbiology, geochemistry and biosphere/geosphere evolution. This Research Topic addresses some of the central research questions about deep subsurface microbiology and biogeochemistry: phylogenetic and physiological microbial diversity in the deep subsurface; microbial activity and survival strategies in severely energy-limited subsurface habitats; microbial activity as reflected in process rates and gene expression patterns; biogeographic isolation and connectivity in deep subsurface microbial communities; the ecological standing of subsurface biospheres in comparison to the surface biosphere – an independently flourishing biosphere, or mere survivors that tolerate burial (along with organic carbon compounds), or a combination of both? Advancing these questions on Earth’s deep subsurface biosphere redefines the habitat range, environmental tolerance, activity and diversity of microbial life.




Microbial Symbioses


Book Description

Plants and animals have evolved ever since their appearance in a largely microbial world. Their own cells are less numerous than the microorganisms that they host and with whom they interact closely. The study of these interactions, termed microbial symbioses, has benefited from the development of new conceptual and technical tools. We are gaining an increasing understanding of the functioning, evolution and central importance of symbiosis in the biosphere. Since the origin of eukaryotic cells, microscopic organisms of our planet have integrated our very existence into their ways of life. The interaction between host and symbiont brings into question the notion of the individual and the traditional representation of the evolution of species, and the manipulation of symbioses facilitates fascinating new perspectives in biotechnology and health. Recent discoveries show that association is one of the main properties of organisms, making a more integrated view of biology necessary. Microbial Symbioses provides a deliberately "symbiocentric outlook, to exhibit how the exploration of microbial symbioses enriches our understanding of life, and the potential future for this discipline. - Offers a concise summary of the most recent discoveries in the field - Shows how symbiosis is acquiring a central role in the biology of the 21st century by transforming our understanding of living things - Presents scientific issues, but also societal and economic related issues (biodiversity, biotechnology) through examples from all branches of the tree of life




Microbial Sulfur Metabolism


Book Description

This revealing book details recent developments in the study of the relationship between sulfur and the microbial agents that affect its metabolism. In recent years, new methods have been applied to study the biochemistry and molecular biology of reactions of the global sulfur cycle, the microorganisms involved and their physiology, metabolism and ecology. These activities have uncovered fascinating new insights for the understanding of aerobic and anaerobic sulfur metabolism.




Hydrothermal Processes at Seafloor Spreading Centers


Book Description

During the past ten years, evidence has developed to indicate that seawater convects through oceanic crust driven by heat derived from creation of lithosphere at the Earth-encircling oceanic ridge-rift system of seafloor spreading centers. This has stimulated multiple lines of research with profound implications for the earth and life sciences. The lines of research comprise the role of hydrothermal convection at seafloor spreading centers in the Earth's thermal regime by cooling of newly formed litho sphere (oceanic crust and upper mantle); in global geochemical cycles and mass balances of certain elements by chemical exchange between circulating seawater and basaltic rocks of oceanic crust; in the concentration of metallic mineral deposits by ore-forming processes; and in adaptation of biological communities based on a previously unrecognized form of chemosynthesis. The first work shop devoted to interdisciplinary consideration of this field was organized by a committee consisting of the co-editors of this volume under the auspices of a NATO Advanced Research Institute (ARI) held 5-8 April 1982 at the Department of Earth Sciences of Cambridge University in England. This volume is a product of that workshop. The papers were written by members of a pioneering research community of marine geologists, geophysicists, geochemists and biologists whose work is at the stage of initial description and interpretation of hydrothermal and associated phenomena at seafloor spreading centers.







Ecosystems of the Deep Oceans


Book Description

This volume examines the deep sea ecosystem from a variety of perspectives. The initial chapters examine the deep-sea floor, the deep pelagic environment and the more specialised chemosynthetic environments of hydrothermal vents and cold seeps. These environments are examined from the perspective of the relationship of deep-sea animals to their physico-chemical environment.Later chapters examine the biogeography of the main deep oceans (Atlantic, Pacific and Indian) with particular attention to the downward flux of surface-derived organic matter and how this drives the processes within the deep-sea ecosystem. The peripheral deep seas including the polar seas and the marginal deep seas (inter alia the Mediterranean, Red, Caribbean and Okhotsk seas) are explored in the same context. The final chapters examine the processes occurring in the deep sea and include an analysis of why the deep sea has high species diversity, how the fauna respond to organic input and how species have adapted reproductive activity in the deep sea. The volume concludes with an analysis of the anthropogenic impact on the deep sea.




The Social Biology of Microbial Communities


Book Description

Beginning with the germ theory of disease in the 19th century and extending through most of the 20th century, microbes were believed to live their lives as solitary, unicellular, disease-causing organisms . This perception stemmed from the focus of most investigators on organisms that could be grown in the laboratory as cellular monocultures, often dispersed in liquid, and under ambient conditions of temperature, lighting, and humidity. Most such inquiries were designed to identify microbial pathogens by satisfying Koch's postulates.3 This pathogen-centric approach to the study of microorganisms produced a metaphorical "war" against these microbial invaders waged with antibiotic therapies, while simultaneously obscuring the dynamic relationships that exist among and between host organisms and their associated microorganisms-only a tiny fraction of which act as pathogens. Despite their obvious importance, very little is actually known about the processes and factors that influence the assembly, function, and stability of microbial communities. Gaining this knowledge will require a seismic shift away from the study of individual microbes in isolation to inquiries into the nature of diverse and often complex microbial communities, the forces that shape them, and their relationships with other communities and organisms, including their multicellular hosts. On March 6 and 7, 2012, the Institute of Medicine's (IOM's) Forum on Microbial Threats hosted a public workshop to explore the emerging science of the "social biology" of microbial communities. Workshop presentations and discussions embraced a wide spectrum of topics, experimental systems, and theoretical perspectives representative of the current, multifaceted exploration of the microbial frontier. Participants discussed ecological, evolutionary, and genetic factors contributing to the assembly, function, and stability of microbial communities; how microbial communities adapt and respond to environmental stimuli; theoretical and experimental approaches to advance this nascent field; and potential applications of knowledge gained from the study of microbial communities for the improvement of human, animal, plant, and ecosystem health and toward a deeper understanding of microbial diversity and evolution. The Social Biology of Microbial Communities: Workshop Summary further explains the happenings of the workshop.




The First Global Integrated Marine Assessment


Book Description

The World Ocean Assessment - or, to give its full title, The First Global Integrated Marine Assessment - is the outcome of the first cycle of the United Nations' Regular Process for Global Reporting and Assessment of the State of the Marine Environment, including Socioeconomic Aspects. The Assessment provides vital, scientifically-grounded bases for the consideration of ocean issues, including climate change, by governments, intergovernmental agencies, non-governmental agencies and all other stakeholders and policymakers involved in ocean affairs. Together with future assessments and related initiatives, it will support the implementation of the recently adopted 2030 Agenda for Sustainable Development, particularly its ocean-related goals. Moreover, it will also form an important reference text for marine science courses.